these 2 derivations will be built:
  /nix/store/bv9hy44i85i0iwv97pdxwi56mhl9qfwj-source.drv
  /nix/store/blb97jbbzskgnnfnk1djp3y0zv70qcb2-psipred-4.0-unstable-2025-07-03.drv
these 2 paths will be fetched (33.9 MiB download, 132.6 MiB unpacked):
  /nix/store/552jpp2zsv2j61ih658v0ank40ljhs6p-blast-2.17.0
  /nix/store/4j52mw8nlkl3x7id2sqw0fxn6yivyazx-tcsh-6.24.16
building '/nix/store/j3syrqjmig3xgl64hsjmazaal3mbcifi-source.drv'
source> structuredAttrs is enabled
source> 
source> trying https://github.com/psipred/psipred/archive/4e8d136076bc0af1534cac053cb54d1ee641571a.tar.gz
source>   % Total    % Received % Xferd  Average Speed  Time    Time    Time   Current
source>                                  Dload  Upload  Total   Spent   Left   Speed
source> 
source>   0      0   0      0   0      0      0      0                              0
source>   0      0   0      0   0      0      0      0                              0
source>   0      0   0      0   0      0      0      0                              0
source> 
source>   0      0   0      0   0      0      0      0                              0
source> 100  4.25M   0  4.25M   0      0  2.87M      0           00:01          4.16M
source> 100  9.76M   0  9.76M   0      0  3.93M      0           00:02          4.82M
source> 100 14.17M   0 14.17M   0      0  4.43M      0           00:03          4.82M
source> 100 14.17M   0 14.17M   0      0  4.43M      0           00:03          4.82M
source> 100 14.17M   0 14.17M   0      0  4.43M      0           00:03          4.82M
source> unpacking source archive /build/download.tar.gz
building '/nix/store/blb97jbbzskgnnfnk1djp3y0zv70qcb2-psipred-4.0-unstable-2025-07-03.drv'
psipred-4.0-unstable-2025-07-03> Running phase: unpackPhase
psipred-4.0-unstable-2025-07-03> unpacking source archive /nix/store/9lzp710lsma8p3mxkygxbzvm3598vpvb-source
psipred-4.0-unstable-2025-07-03> source root is source
psipred-4.0-unstable-2025-07-03> Running phase: patchPhase
psipred-4.0-unstable-2025-07-03> Running phase: updateAutotoolsGnuConfigScriptsPhase
psipred-4.0-unstable-2025-07-03> Running phase: configurePhase
psipred-4.0-unstable-2025-07-03> no configure script, doing nothing
psipred-4.0-unstable-2025-07-03> Running phase: buildPhase
psipred-4.0-unstable-2025-07-03> make: Entering directory '/build/source/src'
psipred-4.0-unstable-2025-07-03> gcc -O -std=gnu89 sspred_avpred.c -lm -o psipred
psipred-4.0-unstable-2025-07-03> sspred_avpred.c: In function 'load_wts':
psipred-4.0-unstable-2025-07-03> sspred_avpred.c:124:13: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result]
psipred-4.0-unstable-2025-07-03>   124 |             fscanf(ifp, "%lf", &t);
psipred-4.0-unstable-2025-07-03>       |             ^~~~~~~~~~~~~~~~~~~~~~
psipred-4.0-unstable-2025-07-03> sspred_avpred.c:131:13: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result]
psipred-4.0-unstable-2025-07-03>   131 |             fscanf(ifp, "%lf", &t);
psipred-4.0-unstable-2025-07-03>       |             ^~~~~~~~~~~~~~~~~~~~~~
psipred-4.0-unstable-2025-07-03> sspred_avpred.c:138:13: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result]
psipred-4.0-unstable-2025-07-03>   138 |             fscanf(ifp, "%lf", &t);
psipred-4.0-unstable-2025-07-03>       |             ^~~~~~~~~~~~~~~~~~~~~~
psipred-4.0-unstable-2025-07-03> sspred_avpred.c:144:9: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result]
psipred-4.0-unstable-2025-07-03>   144 |         fscanf(ifp, "%lf", &t);
psipred-4.0-unstable-2025-07-03>       |         ^~~~~~~~~~~~~~~~~~~~~~
psipred-4.0-unstable-2025-07-03> gcc -O -std=gnu89 sspred_hmulti.c -lm -o psipass2
psipred-4.0-unstable-2025-07-03> sspred_hmulti.c: In function 'load_wts':
psipred-4.0-unstable-2025-07-03> sspred_hmulti.c:90:13: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result]
psipred-4.0-unstable-2025-07-03>    90 |             fscanf(ifp, "%lf", &t);
psipred-4.0-unstable-2025-07-03>       |             ^~~~~~~~~~~~~~~~~~~~~~
psipred-4.0-unstable-2025-07-03> sspred_hmulti.c:98:13: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result]
psipred-4.0-unstable-2025-07-03>    98 |             fscanf(ifp, "%lf", &t);
psipred-4.0-unstable-2025-07-03>       |             ^~~~~~~~~~~~~~~~~~~~~~
psipred-4.0-unstable-2025-07-03> sspred_hmulti.c:105:9: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result]
psipred-4.0-unstable-2025-07-03>   105 |         fscanf(ifp, "%lf", &t);
psipred-4.0-unstable-2025-07-03>       |         ^~~~~~~~~~~~~~~~~~~~~~
psipred-4.0-unstable-2025-07-03> gcc -O -std=gnu89 chkparse.c -lm -o chkparse
psipred-4.0-unstable-2025-07-03> gcc -O -std=gnu89 seq2mtx.c -lm -o seq2mtx
psipred-4.0-unstable-2025-07-03> seq2mtx.c: In function 'getseq':
psipred-4.0-unstable-2025-07-03> seq2mtx.c:130:13: warning: ignoring return value of 'fgets' declared with attribute 'warn_unused_result' [-Wunused-result]
psipred-4.0-unstable-2025-07-03>   130 |             fgets(buf, MAXSEQLEN, lfil);
psipred-4.0-unstable-2025-07-03>       |             ^~~~~~~~~~~~~~~~~~~~~~~~~~~
psipred-4.0-unstable-2025-07-03> seq2mtx.c:131:9: warning: ignoring return value of 'fgets' declared with attribute 'warn_unused_result' [-Wunused-result]
psipred-4.0-unstable-2025-07-03>   131 |         fgets(buf, MAXSEQLEN, lfil);
psipred-4.0-unstable-2025-07-03>       |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~
psipred-4.0-unstable-2025-07-03> seq2mtx.c:137:13: warning: ignoring return value of 'fgets' declared with attribute 'warn_unused_result' [-Wunused-result]
psipred-4.0-unstable-2025-07-03>   137 |             fgets(buf, MAXSEQLEN, lfil);
psipred-4.0-unstable-2025-07-03>       |             ^~~~~~~~~~~~~~~~~~~~~~~~~~~
psipred-4.0-unstable-2025-07-03> seq2mtx.c:141:9: warning: ignoring return value of 'fgets' declared with attribute 'warn_unused_result' [-Wunused-result]
psipred-4.0-unstable-2025-07-03>   141 |         fgets(buf, MAXSEQLEN, lfil);
psipred-4.0-unstable-2025-07-03>       |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~
psipred-4.0-unstable-2025-07-03> seq2mtx.c:143:9: warning: ignoring return value of 'fgets' declared with attribute 'warn_unused_result' [-Wunused-result]
psipred-4.0-unstable-2025-07-03>   143 |         fgets(buf, MAXSEQLEN, lfil);
psipred-4.0-unstable-2025-07-03>       |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~
psipred-4.0-unstable-2025-07-03> seq2mtx.c:148:9: warning: ignoring return value of 'fgets' declared with attribute 'warn_unused_result' [-Wunused-result]
psipred-4.0-unstable-2025-07-03>   148 |         fgets(buf, MAXSEQLEN, lfil);
psipred-4.0-unstable-2025-07-03>       |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~
psipred-4.0-unstable-2025-07-03> make: Leaving directory '/build/source/src'
psipred-4.0-unstable-2025-07-03> Running phase: installPhase
psipred-4.0-unstable-2025-07-03> Running phase: fixupPhase
psipred-4.0-unstable-2025-07-03> shrinking RPATHs of ELF executables and libraries in /nix/store/rawg47rllsx0wdnjc8svwdnf1wmmlpzs-psipred-4.0-unstable-2025-07-03
psipred-4.0-unstable-2025-07-03> shrinking /nix/store/rawg47rllsx0wdnjc8svwdnf1wmmlpzs-psipred-4.0-unstable-2025-07-03/bin/psipred
psipred-4.0-unstable-2025-07-03> shrinking /nix/store/rawg47rllsx0wdnjc8svwdnf1wmmlpzs-psipred-4.0-unstable-2025-07-03/bin/psipass2
psipred-4.0-unstable-2025-07-03> shrinking /nix/store/rawg47rllsx0wdnjc8svwdnf1wmmlpzs-psipred-4.0-unstable-2025-07-03/bin/chkparse
psipred-4.0-unstable-2025-07-03> shrinking /nix/store/rawg47rllsx0wdnjc8svwdnf1wmmlpzs-psipred-4.0-unstable-2025-07-03/bin/seq2mtx
psipred-4.0-unstable-2025-07-03> checking for references to /build/ in /nix/store/rawg47rllsx0wdnjc8svwdnf1wmmlpzs-psipred-4.0-unstable-2025-07-03...
psipred-4.0-unstable-2025-07-03> patching script interpreter paths in /nix/store/rawg47rllsx0wdnjc8svwdnf1wmmlpzs-psipred-4.0-unstable-2025-07-03
psipred-4.0-unstable-2025-07-03> stripping (with command strip and flags -S -p) in /nix/store/rawg47rllsx0wdnjc8svwdnf1wmmlpzs-psipred-4.0-unstable-2025-07-03/libexec /nix/store/rawg47rllsx0wdnjc8svwdnf1wmmlpzs-psipred-4.0-unstable-2025-07-03/bin
psipred-4.0-unstable-2025-07-03> Running phase: installCheckPhase
psipred-4.0-unstable-2025-07-03> Generating mtx file from sequence query.fasta ...
psipred-4.0-unstable-2025-07-03> Predicting secondary structure based on single sequence ...
psipred-4.0-unstable-2025-07-03> Pass1 ...
psipred-4.0-unstable-2025-07-03> Pass2 ...
psipred-4.0-unstable-2025-07-03> Cleaning up ...
psipred-4.0-unstable-2025-07-03> Final output files: query.ss2 query.horiz
psipred-4.0-unstable-2025-07-03> Finished.
psipred-4.0-unstable-2025-07-03> install check OK: 149 lines in query.ss2

post-build step Route build to niks3: ok
Pushing SBEE-Lab/bioinformatics-toolkits to https://niks3.sjanglab.org
time=2026-10-03T21:13:47.792+09:00 level=INFO msg="Uploading 32 paths to niks3.sjanglab.org (1 already cached)"
time=2026-10-03T21:13:47.792+09:00 level=INFO msg="Uploading ph4ib8mxy5yrw40k7a1l03bfd58hq6wj-zstd-1.5.7 (1.2MB)"
time=2026-10-03T21:13:47.792+09:00 level=INFO msg="Uploading wx1y0adli2qggk81pm4marx3km1scqxg-libxcrypt-4.5.2 (149.0KB)"
time=2026-10-03T21:13:47.792+09:00 level=INFO msg="Uploading mpqgjnlmzy3c5hslbgyc3s7zfz3m32lg-bzip2-1.0.8 (86.9KB)"
time=2026-10-03T21:13:47.792+09:00 level=INFO msg="Uploading 552jpp2zsv2j61ih658v0ank40ljhs6p-blast-2.17.0 (131.5MB)"
time=2026-10-03T21:13:47.792+09:00 level=INFO msg="Uploading wgw25d181h0qks7qsfp1bh7c5nd3f0s7-zlib-1.3.2 (133.5KB)"
time=2026-10-03T21:13:47.792+09:00 level=INFO msg="Uploading lhk23vackrdgmxya733h3wp01xz622gn-libpsl-0.21.5 (114.9KB)"
time=2026-10-03T21:13:47.792+09:00 level=INFO msg="Uploading 36alc2mwna4nzf6djdj2hvh4w4r3cai5-curl-8.22.0 (1.3MB)"
time=2026-10-03T21:13:47.793+09:00 level=INFO msg="Uploading 2gfxiwls9hbgwdwcy43mprchwsq36mg6-coreutils-9.11 (1.7MB)"
time=2026-10-03T21:13:47.793+09:00 level=INFO msg="Uploading 10dxp0qxqxxsyiljrh2kp0xqhz6arhcx-bash-5.3p15 (1.8MB)"
time=2026-10-03T21:13:47.793+09:00 level=INFO msg="Uploading q0lbdx5yv93a3md74kjhm0v2kljjii89-libidn2-2.3.8 (363.6KB)"
time=2026-10-03T21:13:47.793+09:00 level=INFO msg="Uploading 9074l1whzhvk68kj5va99ipj412rk5q2-acl-2.4.0 (134.3KB)"
time=2026-10-03T21:13:47.794+09:00 level=INFO msg="Uploading 4j52mw8nlkl3x7id2sqw0fxn6yivyazx-tcsh-6.24.16 (1.1MB)"
time=2026-10-03T21:13:47.794+09:00 level=INFO msg="Uploading rawg47rllsx0wdnjc8svwdnf1wmmlpzs-psipred-4.0-unstable-2025-07-03 (35.2MB)"
time=2026-10-03T21:13:47.794+09:00 level=INFO msg="Uploading q2mkz6ca1alqfqf750dygvakmq8kjrwz-gcc-16.2.0-libgcc (197.6KB)"
time=2026-10-03T21:13:47.794+09:00 level=INFO msg="Uploading 7fjvn38n3dnv092jbmb4m87ik5qvmj7g-brotli-1.2.0-lib (973.9KB)"
time=2026-10-03T21:13:47.794+09:00 level=INFO msg="Uploading sky8mslz50n51np0z4vhdq61jba12fh2-nghttp2-1.70.0-lib (229.9KB)"
time=2026-10-03T21:13:47.794+09:00 level=INFO msg="Uploading chwiiz63ngbsgr2qi82c4g40vn756ky2-gmp-with-cxx-6.3.0 (769.1KB)"
time=2026-10-03T21:13:47.794+09:00 level=INFO msg="Uploading 80z9njiswl9xm6qk93zsjr5bj8v0z2lm-krb5-1.22.2-lib (2.8MB)"
time=2026-10-03T21:13:47.794+09:00 level=INFO msg="Uploading j7qx4s4mr17j1wqgvqdzj33lmrnzb387-gcc-16.2.0-lib (10.3MB)"
time=2026-10-03T21:13:47.795+09:00 level=INFO msg="Uploading hzqwc6pv8sb9qrwivc4h42cr811gs1mk-ncurses-6.6 (3.7MB)"
time=2026-10-03T21:13:47.795+09:00 level=INFO msg="Uploading g60m3aky9f59wgy1gi0y06xwmbw19d6m-xgcc-16.2.0-libgcc (197.5KB)"
time=2026-10-03T21:13:47.795+09:00 level=INFO msg="Uploading h4wfwic161kxrr74jlzla5lsm28hgary-glibc-2.44-25 (33.9MB)"
time=2026-10-03T21:13:47.797+09:00 level=INFO msg="Uploading p6cir20v12fjj5390b8xr9kdynm8bd9h-attr-2.6.0 (88.8KB)"
time=2026-10-03T21:13:47.798+09:00 level=INFO msg="Uploading r9n1wja9zhj3w4r71pggxal3c6xqak2a-nghttp3-1.17.0 (232.4KB)"
time=2026-10-03T21:13:47.798+09:00 level=INFO msg="Uploading 6vqggv3cdqkh098nm8brbs2mwhn6bciy-libssh2-1.11.1 (338.6KB)"
time=2026-10-03T21:13:47.795+09:00 level=INFO msg="Uploading gqd8w84mhr0h24fnc2p4m3hkicsnxsfm-keyutils-1.6.3-lib (42.3KB)"
time=2026-10-03T21:13:47.808+09:00 level=INFO msg="Uploading jp8ql2fnd61xhvb4vsfp0bqwrzf16qrp-libunistring-1.4.2 (2.0MB)"
time=2026-10-03T21:13:47.841+09:00 level=INFO msg="Uploading 9x0m6s73sg89fv5awb95vsac2mbns8n0-sqlite-3.53.3 (5.9MB)"
time=2026-10-03T21:13:48.280+09:00 level=INFO msg="Uploading 8vq8ivlhfqkbhs7r9mmirsdp8gh8hmrm-ngtcp2-1.23.0 (535.6KB)"
time=2026-10-03T21:13:48.286+09:00 level=INFO msg="Uploading 5g20bqhw379iw2vp2jxwzzsf5n1gmh4h-curl-8.22.0-bin (378.4KB)"
time=2026-10-03T21:13:48.286+09:00 level=INFO msg="Uploading 8g4dmf7l8q1mf9w4wfmlcl8gvdgmhb8v-perl-5.42.3 (55.2MB)"
time=2026-10-03T21:13:48.293+09:00 level=INFO msg="Uploading cxd8d2vg70c3pa31v2473hphaa1v0j44-openssl-3.5.8 (9.0MB)"
time=2026-10-03T21:13:50.852+09:00 level=INFO msg="Uploading 33 narinfos"
time=2026-10-03T21:13:51.644+09:00 level=INFO msg="Upload complete. (4.515s)"