these 2 derivations will be built:
  /nix/store/8bhvjfx212ygdxcgx0qskw4cpqfdvlxy-source.drv
  /nix/store/g38763bddffahr6pi2pnvpcgybinir08-plmc-0-unstable-2023-01-21.drv
building '/nix/store/v2sm834l5ljyabqf847yncfjh3dci3yj-source.drv'
source> structuredAttrs is enabled
source> 
source> trying https://github.com/debbiemarkslab/plmc/archive/18c9e55e3bd2f14f4968be19a807b401996c929a.tar.gz
source>   % Total    % Received % Xferd  Average Speed  Time    Time    Time   Current
source>                                  Dload  Upload  Total   Spent   Left   Speed
source> 
source>   0      0   0      0   0      0      0      0                              0
source>   0      0   0      0   0      0      0      0                              0
source>   0      0   0      0   0      0      0      0                              0
source> 
source>   0      0   0      0   0      0      0      0                              0
source> 100 612.2k   0 612.2k   0      0 778.4k      0                              0
source> 100 612.2k   0 612.2k   0      0 778.4k      0                              0
source> 100 612.2k   0 612.2k   0      0 778.3k      0                              0
source> unpacking source archive /build/download.tar.gz
building '/nix/store/g38763bddffahr6pi2pnvpcgybinir08-plmc-0-unstable-2023-01-21.drv'
plmc-0-unstable-2023-01-21> Running phase: unpackPhase
plmc-0-unstable-2023-01-21> unpacking source archive /nix/store/bzddgqn4lgbapwamygmqw7kkgs6pffdp-source
plmc-0-unstable-2023-01-21> source root is source
plmc-0-unstable-2023-01-21> Running phase: patchPhase
plmc-0-unstable-2023-01-21> Running phase: updateAutotoolsGnuConfigScriptsPhase
plmc-0-unstable-2023-01-21> Running phase: configurePhase
plmc-0-unstable-2023-01-21> no configure script, doing nothing
plmc-0-unstable-2023-01-21> Running phase: buildPhase
plmc-0-unstable-2023-01-21> src/weights.c: In function 'ValidateCustomWeightsFile':
plmc-0-unstable-2023-01-21> src/weights.c:258:9: warning: argument 1 null where non-null expected [-Wnonnull]
plmc-0-unstable-2023-01-21>   258 |         fclose(fp);
plmc-0-unstable-2023-01-21>       |         ^~~~~~~~~~
plmc-0-unstable-2023-01-21> In file included from src/weights.c:3:
plmc-0-unstable-2023-01-21> /nix/store/m38wglsqnh1mrmj2cmqa3pjb6w4yjxdi-glibc-2.44-25-dev/include/stdio.h:191:12: note: in a call to function 'fclose' declared 'nonnull'
plmc-0-unstable-2023-01-21>   191 | extern int fclose (FILE *__stream) __nonnull ((1));
plmc-0-unstable-2023-01-21>       |            ^~~~~~
plmc-0-unstable-2023-01-21> Running phase: installPhase
plmc-0-unstable-2023-01-21> Running phase: fixupPhase
plmc-0-unstable-2023-01-21> shrinking RPATHs of ELF executables and libraries in /nix/store/kjy8j41q7a9yp9hzqlak6f8960sr8r5r-plmc-0-unstable-2023-01-21
plmc-0-unstable-2023-01-21> shrinking /nix/store/kjy8j41q7a9yp9hzqlak6f8960sr8r5r-plmc-0-unstable-2023-01-21/bin/plmc
plmc-0-unstable-2023-01-21> checking for references to /build/ in /nix/store/kjy8j41q7a9yp9hzqlak6f8960sr8r5r-plmc-0-unstable-2023-01-21...
plmc-0-unstable-2023-01-21> patching script interpreter paths in /nix/store/kjy8j41q7a9yp9hzqlak6f8960sr8r5r-plmc-0-unstable-2023-01-21
plmc-0-unstable-2023-01-21> stripping (with command strip and flags -S -p) in /nix/store/kjy8j41q7a9yp9hzqlak6f8960sr8r5r-plmc-0-unstable-2023-01-21/bin
plmc-0-unstable-2023-01-21> Running phase: installCheckPhase
plmc-0-unstable-2023-01-21> Found focus DYR_ECOLI as sequence 1
plmc-0-unstable-2023-01-21> 3616 valid sequences out of 3629 
plmc-0-unstable-2023-01-21> 159 sites out of 171
plmc-0-unstable-2023-01-21> Region starts at 1
plmc-0-unstable-2023-01-21> Effective number of samples: 1568.1	(80% identical neighborhood = 1.000 samples)
plmc-0-unstable-2023-01-21> iter	time	cond	fx	-loglk	||h||	||e||
plmc-0-unstable-2023-01-21> 1	2.2	123.66	374586.2	374472.7	98.7	1.0
plmc-0-unstable-2023-01-21> 2	3.1	125.49	324136.4	322978.9	98.7	8.1
plmc-0-unstable-2023-01-21> Gradient optimization: MAXIMUMITERATION
plmc-0-unstable-2023-01-21> install check OK: 40236011 bytes of params

post-build step Route build to niks3: ok
Pushing SBEE-Lab/bioinformatics-toolkits to https://niks3.sjanglab.org
time=2026-10-03T21:13:49.923+09:00 level=INFO msg="Uploading 1 paths to niks3.sjanglab.org (6 already cached)"
time=2026-10-03T21:13:49.924+09:00 level=INFO msg="Uploading kjy8j41q7a9yp9hzqlak6f8960sr8r5r-plmc-0-unstable-2023-01-21 (108.4KB)"
time=2026-10-03T21:13:50.678+09:00 level=INFO msg="Uploading 7 narinfos"
time=2026-10-03T21:13:51.168+09:00 level=INFO msg="Upload complete. (1.384s)"