these 2 derivations will be built: /nix/store/pm16jmipjcasxwk9brcrn1nhyhs4by3a-pydna-5.5.16.tar.gz.drv /nix/store/z748a4mqd31aqvqs83qfg9v82bigvzjw-python3.14-pydna-5.5.16.drv these 21 paths will be fetched (1.5 MiB download, 7.5 MiB unpacked): /nix/store/icp6fgjg12fks3i0wfl0bjfjgvd03y9c-ensure-newer-sources-hook /nix/store/cgknvydg87rr6zg9031vqd9jdhf31fai-pypa-build-hook.sh /nix/store/vcyvxgzq8xh633sx9gghzjh0fkcl6x8b-pypa-install-hook /nix/store/w6dircc3f4f745my3gq95hdbkk7bvr0h-python-catch-conflicts-hook /nix/store/35rk2x7hsckqsn42407rgjjaladlrcrh-python-imports-check-hook.sh /nix/store/9zhvs91agisk6q7yvgdznm83kyzaaany-python-metadata-check-hook.sh /nix/store/j1na7wnx9wxkkv9kw9fdhrddzn3apvqp-python-namespaces-hook.sh /nix/store/iwc9mdnh2ws5j0l7iy7bqbff6drlvssq-python-output-dist-hook /nix/store/03q7kmbamldzm9d6k782a3xwmjmjbvr9-python-relax-deps-hook /nix/store/k7ycyrwznqz0amqcy78yi1gabhz9xcnz-python-remove-bin-bytecode-hook /nix/store/jd0nnjczrfnb0kn6p42lqm26dfiylvyp-python-remove-tests-dir-hook /nix/store/vwpxymga69qm3h5yd920p8iy4xkzpbzb-python-runtime-deps-check-hook.sh /nix/store/pi4gvq8jbjh40qvd6i0yclxwpr64vpmw-python3-3.14.7-env /nix/store/lqvxqpqa7yw0qcl5vf7i2hkh00zls5m0-python3.14-build-1.5.1 /nix/store/9726sl5xcs8527il2rkaqk50cc1xgj2r-python3.14-dunamai-1.25.0 /nix/store/4cahraqqkmfws6i3l5kwpayn0i0i12s5-python3.14-installer-1.0.1 /nix/store/s3ck75k46x650gp5ivx0fyws2kaahxhn-python3.14-poetry-core-2.4.1 /nix/store/p6795hng4fdk71hbxp9w5rz9pvfchg1v-python3.14-poetry-dynamic-versioning-1.9.1 /nix/store/khhd398h6fy0alc7fjfyqssd1bz58xr1-python3.14-pyproject-hooks-1.2.0 /nix/store/byxqz565bpx22h98v1qm1pl6x3ny72w1-python3.14-wheel-0.47.0 /nix/store/bnm3ppcxy786lcfq6lqni25mi9svpj32-wrap-python-hook building '/nix/store/8vg26mzrjh1rjk1m6ic7ijd7qrpqxn5b-pydna-5.5.16.tar.gz.drv' pydna-5.5.16.tar.gz> structuredAttrs is enabled pydna-5.5.16.tar.gz> pydna-5.5.16.tar.gz> trying https://files.pythonhosted.org/packages/source/p/pydna/pydna-5.5.16.tar.gz pydna-5.5.16.tar.gz> % Total % Received % Xferd Average Speed Time Time Time Current pydna-5.5.16.tar.gz> Dload Upload Total Spent Left Speed pydna-5.5.16.tar.gz> pydna-5.5.16.tar.gz> 0 0 0 0 0 0 0 0 0 pydna-5.5.16.tar.gz> 0 0 0 0 0 0 0 0 0 pydna-5.5.16.tar.gz> 0 0 0 0 0 0 0 0 0 pydna-5.5.16.tar.gz> pydna-5.5.16.tar.gz> 0 0 0 0 0 0 0 0 0 pydna-5.5.16.tar.gz> 100 185.3k 100 185.3k 0 0 7.09M 0 0 pydna-5.5.16.tar.gz> 100 185.3k 100 185.3k 0 0 7.06M 0 0 pydna-5.5.16.tar.gz> 100 185.3k 100 185.3k 0 0 7.04M 0 0 building '/nix/store/z748a4mqd31aqvqs83qfg9v82bigvzjw-python3.14-pydna-5.5.16.drv' python3.14-pydna-5.5.16> Sourcing python-remove-tests-dir-hook python3.14-pydna-5.5.16> Sourcing python-catch-conflicts-hook.sh python3.14-pydna-5.5.16> Sourcing python-remove-bin-bytecode-hook.sh python3.14-pydna-5.5.16> Sourcing pypa-build-hook python3.14-pydna-5.5.16> Using pypaBuildPhase python3.14-pydna-5.5.16> Sourcing python-runtime-deps-check-hook python3.14-pydna-5.5.16> Using pythonRuntimeDepsCheckHook python3.14-pydna-5.5.16> Sourcing pypa-install-hook python3.14-pydna-5.5.16> Using pypaInstallPhase python3.14-pydna-5.5.16> Sourcing python-imports-check-hook.sh python3.14-pydna-5.5.16> Using pythonImportsCheckPhase python3.14-pydna-5.5.16> Sourcing python-metadata-check-hook.sh python3.14-pydna-5.5.16> Using pythonMetadataCheckPhase python3.14-pydna-5.5.16> Sourcing python-namespaces-hook python3.14-pydna-5.5.16> Sourcing python-catch-conflicts-hook.sh python3.14-pydna-5.5.16> Using checkPhaseThreadLimitHook python3.14-pydna-5.5.16> Running phase: unpackPhase python3.14-pydna-5.5.16> unpacking source archive /nix/store/rx6ia5j881xwiajjd5j0nznxsy38blqx-pydna-5.5.16.tar.gz python3.14-pydna-5.5.16> source root is pydna-5.5.16 python3.14-pydna-5.5.16> setting SOURCE_DATE_EPOCH to timestamp 315619200 of file "pydna-5.5.16/src/pydna/utils.py" python3.14-pydna-5.5.16> Running phase: patchPhase python3.14-pydna-5.5.16> Running phase: updateAutotoolsGnuConfigScriptsPhase python3.14-pydna-5.5.16> Running phase: configurePhase python3.14-pydna-5.5.16> no configure script, doing nothing python3.14-pydna-5.5.16> Running phase: buildPhase python3.14-pydna-5.5.16> Executing pypaBuildPhase python3.14-pydna-5.5.16> Setting POETRY_DYNAMIC_VERSIONING_BYPASS to 5.5.16 python3.14-pydna-5.5.16> Creating a wheel... python3.14-pydna-5.5.16> pypa build flags: --no-isolation --outdir dist/ --wheel python3.14-pydna-5.5.16> * Getting build dependencies for wheel... python3.14-pydna-5.5.16> * Building wheel... python3.14-pydna-5.5.16> Successfully built pydna-5.5.16-py3-none-any.whl python3.14-pydna-5.5.16> Finished creating a wheel... python3.14-pydna-5.5.16> /build/pydna-5.5.16/dist /build/pydna-5.5.16 python3.14-pydna-5.5.16> Unpacking to: unpacked/pydna-5.5.16...OK python3.14-pydna-5.5.16> Repacking wheel as ./pydna-5.5.16-py3-none-any.whl...OK python3.14-pydna-5.5.16> /build/pydna-5.5.16 python3.14-pydna-5.5.16> Finished executing pypaBuildPhase python3.14-pydna-5.5.16> Running phase: pythonRuntimeDepsCheckHook python3.14-pydna-5.5.16> Executing pythonRuntimeDepsCheck python3.14-pydna-5.5.16> Checking runtime dependencies for pydna-5.5.16-py3-none-any.whl python3.14-pydna-5.5.16> Finished executing pythonRuntimeDepsCheck python3.14-pydna-5.5.16> Running phase: installPhase python3.14-pydna-5.5.16> Executing pypaInstallPhase python3.14-pydna-5.5.16> Successfully installed pydna-5.5.16-py3-none-any.whl python3.14-pydna-5.5.16> Finished executing pypaInstallPhase python3.14-pydna-5.5.16> Running phase: pythonOutputDistPhase python3.14-pydna-5.5.16> Executing pythonOutputDistPhase python3.14-pydna-5.5.16> Finished executing pythonOutputDistPhase python3.14-pydna-5.5.16> Running phase: fixupPhase python3.14-pydna-5.5.16> shrinking RPATHs of ELF executables and libraries in /nix/store/q21hq7smsngrdsd6bi3dl702nx7mnr97-python3.14-pydna-5.5.16 python3.14-pydna-5.5.16> checking for references to /build/ in /nix/store/q21hq7smsngrdsd6bi3dl702nx7mnr97-python3.14-pydna-5.5.16... python3.14-pydna-5.5.16> patching script interpreter paths in /nix/store/q21hq7smsngrdsd6bi3dl702nx7mnr97-python3.14-pydna-5.5.16 python3.14-pydna-5.5.16> /nix/store/q21hq7smsngrdsd6bi3dl702nx7mnr97-python3.14-pydna-5.5.16/lib/python3.14/site-packages/pydna/amplicon.py: interpreter directive changed from "#!/usr/bin/env python3" to "/nix/store/d64q19q1xjdwfhqx6czvrjgrhq0n3lcc-python3-3.14.7/bin/python3" python3.14-pydna-5.5.16> /nix/store/q21hq7smsngrdsd6bi3dl702nx7mnr97-python3.14-pydna-5.5.16/lib/python3.14/site-packages/pydna/fakeseq.py: interpreter directive changed from "#!/usr/bin/env python3" to "/nix/store/d64q19q1xjdwfhqx6czvrjgrhq0n3lcc-python3-3.14.7/bin/python3" python3.14-pydna-5.5.16> /nix/store/q21hq7smsngrdsd6bi3dl702nx7mnr97-python3.14-pydna-5.5.16/lib/python3.14/site-packages/pydna/gel.py: interpreter directive changed from "#!/usr/bin/env python3" to "/nix/store/d64q19q1xjdwfhqx6czvrjgrhq0n3lcc-python3-3.14.7/bin/python3" python3.14-pydna-5.5.16> /nix/store/q21hq7smsngrdsd6bi3dl702nx7mnr97-python3.14-pydna-5.5.16/lib/python3.14/site-packages/pydna/ladders.py: interpreter directive changed from "#!/usr/bin/env python3" to "/nix/store/d64q19q1xjdwfhqx6czvrjgrhq0n3lcc-python3-3.14.7/bin/python3" python3.14-pydna-5.5.16> /nix/store/q21hq7smsngrdsd6bi3dl702nx7mnr97-python3.14-pydna-5.5.16/lib/python3.14/site-packages/pydna/seqrecord.py: interpreter directive changed from "#!/usr/bin/env python3" to "/nix/store/d64q19q1xjdwfhqx6czvrjgrhq0n3lcc-python3-3.14.7/bin/python3" python3.14-pydna-5.5.16> stripping (with command strip and flags -S -p) in /nix/store/q21hq7smsngrdsd6bi3dl702nx7mnr97-python3.14-pydna-5.5.16/lib python3.14-pydna-5.5.16> shrinking RPATHs of ELF executables and libraries in /nix/store/haqzmqc9sn683w6ldi3issp8ax50cbpb-python3.14-pydna-5.5.16-dist python3.14-pydna-5.5.16> checking for references to /build/ in /nix/store/haqzmqc9sn683w6ldi3issp8ax50cbpb-python3.14-pydna-5.5.16-dist... python3.14-pydna-5.5.16> patching script interpreter paths in /nix/store/haqzmqc9sn683w6ldi3issp8ax50cbpb-python3.14-pydna-5.5.16-dist python3.14-pydna-5.5.16> Executing pythonRemoveTestsDir python3.14-pydna-5.5.16> Finished executing pythonRemoveTestsDir python3.14-pydna-5.5.16> Running phase: pythonCatchConflictsPhase python3.14-pydna-5.5.16> Running phase: pythonRemoveBinBytecodePhase python3.14-pydna-5.5.16> Running phase: pythonImportsCheckPhase python3.14-pydna-5.5.16> Executing pythonImportsCheckPhase python3.14-pydna-5.5.16> Check whether the following modules can be imported: pydna pydna.assembly pydna.dseqrecord python3.14-pydna-5.5.16> Running phase: pythonMetadataCheckPhase python3.14-pydna-5.5.16> Executing pythonMetadataCheckPhase post-build step Route build to niks3: ok Pushing SBEE-Lab/bioinformatics-toolkits to https://niks3.sjanglab.org time=2026-09-30T13:34:01.906+09:00 level=INFO msg="All 1 paths already cached"