these 3 derivations will be built: /nix/store/1ql8hjbmj5y6v4292k19dkad3mbw066b-source.drv /nix/store/hz1df99wizj8jcdz2lrlrv2wfd5hp8q4-ncbi-datasets-18.38.0-deps.tar.drv /nix/store/wkyvpkhdhwqjdzcapq751kl5zhivmkrb-ncbi-datasets-18.38.0.drv these 7 paths will be fetched (493.4 MiB download, 713.0 MiB unpacked): /nix/store/56gr2m5pxckwi5kq01xpmzbjriwbkh47-bash /nix/store/nxgx3prs9wgfrs7xm8d6k05nb4vias2a-bash /nix/store/vcxgl9x6x3bkxrkqxp5jlqj3scf3yd1l-bazel-7.6.0 /nix/store/vsbg3a336cbzar3nm0kxf43p89hgvnzv-bazel-7.6.0 /nix/store/jzprnrfvy0h91n0bldbpwdd7rnprx9cj-bazel-rc /nix/store/vymiz4fvnc1s8k19kz2lqvkv3g2k0ys6-openjdk-headless-21.0.12.1+1 /nix/store/5kj5frfyiv9f2g6bx023lb6gqaikk3qf-source building '/nix/store/zdzpgrjk9fr0w38zbmmhhh46xkl83l8q-source.drv' source> structuredAttrs is enabled source> source> trying https://github.com/ncbi/datasets/archive/719e1c231c9c61629bb9870800525bec9dc13714.tar.gz source> % Total % Received % Xferd Average Speed Time Time Time Current source> Dload Upload Total Spent Left Speed source> source> 0 0 0 0 0 0 0 0 0 source> 0 0 0 0 0 0 0 0 0 source> 0 0 0 0 0 0 0 0 0 source> source> 0 0 0 0 0 0 0 0 0 source> 100 7.26M 0 7.26M 0 0 7.94M 0 0 source> 100 7.26M 0 7.26M 0 0 7.94M 0 0 source> 100 7.26M 0 7.26M 0 0 7.94M 0 0 source> unpacking source archive /build/download.tar.gz building '/nix/store/fa26cy95m7xlnk5ydp9hg3fyshsbgmrz-ncbi-datasets-18.38.0-deps.tar.drv' ncbi-datasets-18.38.0-deps.tar> Running phase: unpackPhase ncbi-datasets-18.38.0-deps.tar> unpacking source archive /nix/store/p3pfxf5jyw1z4fx58pa3fv9s35w45srd-source ncbi-datasets-18.38.0-deps.tar> source root is source/client ncbi-datasets-18.38.0-deps.tar> Running phase: patchPhase ncbi-datasets-18.38.0-deps.tar> Running phase: updateAutotoolsGnuConfigScriptsPhase ncbi-datasets-18.38.0-deps.tar> Running phase: configurePhase ncbi-datasets-18.38.0-deps.tar> no configure script, doing nothing ncbi-datasets-18.38.0-deps.tar> Running phase: buildPhase ncbi-datasets-18.38.0-deps.tar> Extracting Bazel installation... ncbi-datasets-18.38.0-deps.tar> OpenJDK 64-Bit Server VM warning: Options -Xverify:none and -noverify were deprecated in JDK 13 and will likely be removed in a future release. ncbi-datasets-18.38.0-deps.tar> (11:58:40) INFO: Current date is 2026-09-29 ncbi-datasets-18.38.0-deps.tar> (11:58:40) Computing main repo mapping: ncbi-datasets-18.38.0-deps.tar> (11:58:41) Loading: ncbi-datasets-18.38.0-deps.tar> (11:58:41) Loading: 0 packages loaded ncbi-datasets-18.38.0-deps.tar> (11:58:42) Loading: 0 packages loaded ncbi-datasets-18.38.0-deps.tar> currently loading: apps/public/Datasets/v2/cmd/datasets ncbi-datasets-18.38.0-deps.tar> (11:58:43) Loading: 0 packages loaded ncbi-datasets-18.38.0-deps.tar> currently loading: apps/public/Datasets/v2/cmd/datasets ncbi-datasets-18.38.0-deps.tar> (11:58:43) Analyzing: target //apps/public/Datasets/v2/cmd/datasets:datasets (1 packages loaded, 0 targets configured) ncbi-datasets-18.38.0-deps.tar> (11:58:44) Analyzing: target //apps/public/Datasets/v2/cmd/datasets:datasets (41 packages loaded, 8 targets configured) ncbi-datasets-18.38.0-deps.tar> (11:58:45) Analyzing: target //apps/public/Datasets/v2/cmd/datasets:datasets (43 packages loaded, 8 targets configured) ncbi-datasets-18.38.0-deps.tar> (11:58:47) Analyzing: target //apps/public/Datasets/v2/cmd/datasets:datasets (79 packages loaded, 8 targets configured) ncbi-datasets-18.38.0-deps.tar> (11:58:48) Analyzing: target //apps/public/Datasets/v2/cmd/datasets:datasets (96 packages loaded, 1234 targets configured) ncbi-datasets-18.38.0-deps.tar> (11:58:50) Analyzing: target //apps/public/Datasets/v2/cmd/datasets:datasets (96 packages loaded, 1234 targets configured) ncbi-datasets-18.38.0-deps.tar> (11:58:51) Analyzing: target //apps/public/Datasets/v2/cmd/datasets:datasets (96 packages loaded, 1234 targets configured) ncbi-datasets-18.38.0-deps.tar> (11:58:52) Analyzing: target //apps/public/Datasets/v2/cmd/datasets:datasets (105 packages loaded, 11226 targets configured) ncbi-datasets-18.38.0-deps.tar> (11:58:53) WARNING: /build/source/client/MODULE.bazel:16:24: The module extension go_deps defined in @gazelle//:extensions.bzl reported incorrect imports of repositories via use_repo(): ncbi-datasets-18.38.0-deps.tar> ncbi-datasets-18.38.0-deps.tar> Not imported, but reported as direct dependencies by the extension (may cause the build to fail): ncbi-datasets-18.38.0-deps.tar> com_github_stretchr_testify, ke_bou_monkey ncbi-datasets-18.38.0-deps.tar> ncbi-datasets-18.38.0-deps.tar> Fix the use_repo calls by running 'bazel mod tidy'. ncbi-datasets-18.38.0-deps.tar> (11:58:53) Analyzing: target //apps/public/Datasets/v2/cmd/datasets:datasets (107 packages loaded, 11227 targets configured) ncbi-datasets-18.38.0-deps.tar> (11:59:01) Analyzing: target //apps/public/Datasets/v2/cmd/datasets:datasets (107 packages loaded, 11227 targets configured) ncbi-datasets-18.38.0-deps.tar> (11:59:02) Analyzing: target //apps/public/Datasets/v2/cmd/datasets:datasets (107 packages loaded, 11227 targets configured) ncbi-datasets-18.38.0-deps.tar> (11:59:03) Analyzing: target //apps/public/Datasets/v2/cmd/datasets:datasets (108 packages loaded, 11249 targets configured) ncbi-datasets-18.38.0-deps.tar> (11:59:04) Analyzing: target //apps/public/Datasets/v2/cmd/datasets:datasets (109 packages loaded, 11253 targets configured) ncbi-datasets-18.38.0-deps.tar> (11:59:06) Analyzing: target //apps/public/Datasets/v2/cmd/datasets:datasets (109 packages loaded, 11253 targets configured) ncbi-datasets-18.38.0-deps.tar> (11:59:07) Analyzing: target //apps/public/Datasets/v2/cmd/datasets:datasets (110 packages loaded, 11257 targets configured) ncbi-datasets-18.38.0-deps.tar> (11:59:08) Analyzing: target //apps/public/Datasets/v2/cmd/datasets:datasets (111 packages loaded, 11261 targets configured) ncbi-datasets-18.38.0-deps.tar> (11:59:09) Analyzing: target //apps/public/Datasets/v2/cmd/datasets:datasets (112 packages loaded, 11266 targets configured) ncbi-datasets-18.38.0-deps.tar> (11:59:11) Analyzing: target //apps/public/Datasets/v2/cmd/datasets:datasets (113 packages loaded, 11282 targets configured) ncbi-datasets-18.38.0-deps.tar> (11:59:12) Analyzing: target //apps/public/Datasets/v2/cmd/datasets:datasets (114 packages loaded, 11285 targets configured) ncbi-datasets-18.38.0-deps.tar> (11:59:13) Analyzing: target //apps/public/Datasets/v2/cmd/datasets:datasets (114 packages loaded, 11285 targets configured) ncbi-datasets-18.38.0-deps.tar> (11:59:15) Analyzing: target //apps/public/Datasets/v2/cmd/datasets:datasets (115 packages loaded, 11287 targets configured) ncbi-datasets-18.38.0-deps.tar> (11:59:16) Analyzing: target //apps/public/Datasets/v2/cmd/datasets:datasets (116 packages loaded, 11307 targets configured) ncbi-datasets-18.38.0-deps.tar> (11:59:18) Analyzing: target //apps/public/Datasets/v2/cmd/datasets:datasets (116 packages loaded, 11307 targets configured) ncbi-datasets-18.38.0-deps.tar> (11:59:19) Analyzing: target //apps/public/Datasets/v2/cmd/datasets:datasets (117 packages loaded, 11312 targets configured) ncbi-datasets-18.38.0-deps.tar> (11:59:21) Analyzing: target //apps/public/Datasets/v2/cmd/datasets:datasets (119 packages loaded, 11327 targets configured) ncbi-datasets-18.38.0-deps.tar> (11:59:22) Analyzing: target //apps/public/Datasets/v2/cmd/datasets:datasets (120 packages loaded, 11329 targets configured) ncbi-datasets-18.38.0-deps.tar> (11:59:23) Analyzing: target //apps/public/Datasets/v2/cmd/datasets:datasets (122 packages loaded, 11375 targets configured) ncbi-datasets-18.38.0-deps.tar> (11:59:25) Analyzing: target //apps/public/Datasets/v2/cmd/datasets:datasets (137 packages loaded, 11439 targets configured) ncbi-datasets-18.38.0-deps.tar> (11:59:26) Analyzing: target //apps/public/Datasets/v2/cmd/datasets:datasets (143 packages loaded, 13959 targets configured) ncbi-datasets-18.38.0-deps.tar> (11:59:27) Analyzing: target //apps/public/Datasets/v2/cmd/datasets:datasets (147 packages loaded, 14042 targets configured) ncbi-datasets-18.38.0-deps.tar> (11:59:28) Analyzing: target //apps/public/Datasets/v2/cmd/datasets:datasets (147 packages loaded, 14042 targets configured) ncbi-datasets-18.38.0-deps.tar> (11:59:29) Analyzing: target //apps/public/Datasets/v2/cmd/datasets:datasets (148 packages loaded, 16393 targets configured) ncbi-datasets-18.38.0-deps.tar> (11:59:30) INFO: Analyzed target //apps/public/Datasets/v2/cmd/datasets:datasets (164 packages loaded, 16602 targets configured). ncbi-datasets-18.38.0-deps.tar> (11:59:30) INFO: Found 1 target... ncbi-datasets-18.38.0-deps.tar> (11:59:30) INFO: Elapsed time: 52.672s, Critical Path: 0.00s ncbi-datasets-18.38.0-deps.tar> (11:59:30) INFO: 0 processes. ncbi-datasets-18.38.0-deps.tar> (11:59:30) INFO: Build completed successfully, 0 total actions ncbi-datasets-18.38.0-deps.tar> buildPhase completed in 53 seconds ncbi-datasets-18.38.0-deps.tar> Running phase: installPhase building '/nix/store/wkyvpkhdhwqjdzcapq751kl5zhivmkrb-ncbi-datasets-18.38.0.drv' ncbi-datasets-18.38.0> Running phase: unpackPhase ncbi-datasets-18.38.0> unpacking source archive /nix/store/p3pfxf5jyw1z4fx58pa3fv9s35w45srd-source ncbi-datasets-18.38.0> source root is source/client ncbi-datasets-18.38.0> Running phase: patchPhase ncbi-datasets-18.38.0> Running phase: updateAutotoolsGnuConfigScriptsPhase ncbi-datasets-18.38.0> Running phase: configurePhase ncbi-datasets-18.38.0> no configure script, doing nothing ncbi-datasets-18.38.0> Running phase: buildPhase ncbi-datasets-18.38.0> Extracting Bazel installation... ncbi-datasets-18.38.0> OpenJDK 64-Bit Server VM warning: Options -Xverify:none and -noverify were deprecated in JDK 13 and will likely be removed in a future release. ncbi-datasets-18.38.0> (11:59:39) INFO: Current date is 2026-09-29 ncbi-datasets-18.38.0> (11:59:39) Computing main repo mapping: ncbi-datasets-18.38.0> (11:59:40) Loading: ncbi-datasets-18.38.0> (11:59:40) Loading: 0 packages loaded ncbi-datasets-18.38.0> (11:59:40) Analyzing: target //apps/public/Datasets/v2/cmd/datasets:datasets (1 packages loaded, 0 targets configured) ncbi-datasets-18.38.0> (11:59:40) Analyzing: target //apps/public/Datasets/v2/cmd/datasets:datasets (1 packages loaded, 0 targets configured) ncbi-datasets-18.38.0> ncbi-datasets-18.38.0> (11:59:41) WARNING: /build/source/client/MODULE.bazel:16:24: The module extension go_deps defined in @gazelle//:extensions.bzl reported incorrect imports of repositories via use_repo(): ncbi-datasets-18.38.0> ncbi-datasets-18.38.0> Not imported, but reported as direct dependencies by the extension (may cause the build to fail): ncbi-datasets-18.38.0> com_github_stretchr_testify, ke_bou_monkey ncbi-datasets-18.38.0> ncbi-datasets-18.38.0> Fix the use_repo calls by running 'bazel mod tidy'. ncbi-datasets-18.38.0> (11:59:41) Analyzing: target //apps/public/Datasets/v2/cmd/datasets:datasets (160 packages loaded, 16477 targets configured) ncbi-datasets-18.38.0> ncbi-datasets-18.38.0> (11:59:42) INFO: Analyzed target //apps/public/Datasets/v2/cmd/datasets:datasets (164 packages loaded, 16598 targets configured). ncbi-datasets-18.38.0> (11:59:42) WARNING: /build/source/client/openapi/BUILD:23:22: input 'openapi/templates/go' of //openapi:openapi.genlib.v2.go is a directory; dependency checking of directories is unsound ncbi-datasets-18.38.0> (11:59:42) [6 / 50] GoToolchainBinaryBuild external/rules_go~~go_sdk~datasets_client__download_0/builder [for tool]; 0s linux-sandbox ... (2 actions running) ncbi-datasets-18.38.0> (11:59:44) [7 / 50] GoToolchainBinaryBuild external/rules_go~~go_sdk~datasets_client__download_0/builder [for tool]; 2s linux-sandbox ... (2 actions, 1 running) ncbi-datasets-18.38.0> (11:59:46) [8 / 50] GoToolchainBinaryBuild external/rules_go~~go_sdk~datasets_client__download_0/builder [for tool]; 4s linux-sandbox ncbi-datasets-18.38.0> (11:59:53) [9 / 50] [Prepa] Creating symlink bazel-out/k8-opt-exec-ST-d57f47055a04/bin/external/rules_go~~go_sdk~datasets_client__download_0/builder_reset/builder [for tool] ncbi-datasets-18.38.0> (11:59:54) [10 / 50] GoStdlib external/rules_go~/stdlib_/pkg; 1s linux-sandbox ncbi-datasets-18.38.0> (12:00:02) [11 / 50] [Prepa] GoCompilePkg external/gazelle~~go_deps~com_github_araddon_dateparse/dateparse.a ... (2 actions, 0 running) ncbi-datasets-18.38.0> (12:00:04) [45 / 50] GoCompilePkg openapi/golib.v2.a; 1s linux-sandbox ncbi-datasets-18.38.0> (12:00:05) [48 / 50] GoCompilePkg apps/public/Datasets/v2/cmd/datasets/datasets.a; 0s linux-sandbox ncbi-datasets-18.38.0> (12:00:06) INFO: Found 1 target... ncbi-datasets-18.38.0> Target //apps/public/Datasets/v2/cmd/datasets:datasets up-to-date: ncbi-datasets-18.38.0> bazel-bin/apps/public/Datasets/v2/cmd/datasets/datasets_/datasets ncbi-datasets-18.38.0> (12:00:06) INFO: Elapsed time: 29.875s, Critical Path: 23.81s ncbi-datasets-18.38.0> (12:00:06) INFO: 50 processes: 7 internal, 42 linux-sandbox, 1 local. ncbi-datasets-18.38.0> (12:00:06) INFO: Build completed successfully, 50 total actions ncbi-datasets-18.38.0> buildPhase completed in 31 seconds ncbi-datasets-18.38.0> Running phase: installPhase ncbi-datasets-18.38.0> Running phase: fixupPhase ncbi-datasets-18.38.0> shrinking RPATHs of ELF executables and libraries in /nix/store/101adzdc0np8m8qfbm51plrx75f3mkys-ncbi-datasets-18.38.0 ncbi-datasets-18.38.0> shrinking /nix/store/101adzdc0np8m8qfbm51plrx75f3mkys-ncbi-datasets-18.38.0/bin/datasets ncbi-datasets-18.38.0> checking for references to /build/ in /nix/store/101adzdc0np8m8qfbm51plrx75f3mkys-ncbi-datasets-18.38.0... ncbi-datasets-18.38.0> patching script interpreter paths in /nix/store/101adzdc0np8m8qfbm51plrx75f3mkys-ncbi-datasets-18.38.0 ncbi-datasets-18.38.0> stripping (with command strip and flags -S -p) in /nix/store/101adzdc0np8m8qfbm51plrx75f3mkys-ncbi-datasets-18.38.0/bin post-build step Route build to niks3: ok Pushing SBEE-Lab/bioinformatics-toolkits to https://niks3.sjanglab.org time=2026-09-29T21:00:09.275+09:00 level=INFO msg="Uploading 1 paths to niks3.sjanglab.org (4 already cached)" time=2026-09-29T21:00:09.275+09:00 level=INFO msg="Uploading 101adzdc0np8m8qfbm51plrx75f3mkys-ncbi-datasets-18.38.0 (12.6MB)" time=2026-09-29T21:00:10.606+09:00 level=INFO msg="Uploading 1 narinfos" time=2026-09-29T21:00:10.976+09:00 level=INFO msg="Upload complete. (2.114s)"