these 3 derivations will be built: /nix/store/3bg7syjn58qb5bwkqxpmx30f3pa25yvk-bcbio_gff-0.7.1-py3-none-any.whl.drv /nix/store/09f1ikc0wr59c007ycx63v1vg2nkfsp8-python3.14-bcbio-gff-0.7.1.drv /nix/store/5kpam8mdmsb9dbczfs03vh9k076jqjj8-python3.14-dna-features-viewer-3.1.5.drv these 20 paths will be fetched (56.9 MiB download, 269.9 MiB unpacked): /nix/store/zn1jsv5nk7c89cacwk6ffyda5ndm7da0-libimagequant-4.4.1 /nix/store/47cv8gslxwz2i759ln4swcvgzz5vy100-python3.14-biopython-1.86 /nix/store/shcci7i58z906hs69kzq79m75hbvv6xw-python3.14-bokeh-3.8.2 /nix/store/g6b5hvjcnsca8nfga7j4fym4ifv7mrm5-python3.14-contourpy-1.3.3 /nix/store/2fb340c4r1zp6bp3i7mary0582vk0ra2-python3.14-cycler-0.12.1 /nix/store/wjir9hqdc5z6fi457jw09nzxsk0aw27j-python3.14-fonttools-4.63.0 /nix/store/2q5k90r1cc528pan3d2lakg5n6k4kla7-python3.14-kiwisolver-1.5.0 /nix/store/izdi4wqm0rrc4srsq9gcazb6mv5ml2v1-python3.14-matplotlib-3.11.1 /nix/store/sdd13vm3yf8fwhhasc5r0fm2pkzq9cmx-python3.14-narwhals-2.23.0 /nix/store/q0h6ixa4mz9vxbfi0hh4h06jv9xrz5dd-python3.14-pandas-3.0.4 /nix/store/2fwiimdk8289pp3fd0k413dyj05q85ll-python3.14-pillow-12.3.0 /nix/store/xzrd8n8xvn4bw7m48mfa6fmwc2qjygc6-python3.14-pyparsing-3.3.2 /nix/store/1crz3lxxxj0yrj2y4b9263rb20lvh364-python3.14-pytz-2026.2 /nix/store/knqn36sw52d4hbrbnd8q73n32lnk66d2-python3.14-tkinter-3.14.7 /nix/store/51jszag6j36wlyzkxgcmn2qq20549fsz-python3.14-tornado-6.5.7 /nix/store/bd5kcv7454jskw4m939lda59nyk66g7a-python3.14-xyzservices-2026.3.0 /nix/store/8vw8s7qx59v3df9smlkbflr31wq2y12i-tcl-9.0.4 /nix/store/dpvgb8s4f0wp55x76w1fp96pb3kljk30-tk-9.0.4 /nix/store/bvw8nys1ibsb5jck0bfndy5b6v2vmfsl-tk-9.0.4-man /nix/store/j8dkpkq70a8z6acbs5f0cya91kzdi52g-wheel-unpack-hook.sh building '/nix/store/8082k8086mpwvxr0cr152scwmq9apfaf-bcbio_gff-0.7.1-py3-none-any.whl.drv' bcbio_gff-0.7.1-py3-none-any.whl> structuredAttrs is enabled bcbio_gff-0.7.1-py3-none-any.whl> bcbio_gff-0.7.1-py3-none-any.whl> trying https://files.pythonhosted.org/packages/py3/b/bcbio_gff/bcbio_gff-0.7.1-py3-none-any.whl bcbio_gff-0.7.1-py3-none-any.whl> % Total % Received % Xferd Average Speed Time Time Time Current bcbio_gff-0.7.1-py3-none-any.whl> Dload Upload Total Spent Left Speed bcbio_gff-0.7.1-py3-none-any.whl> bcbio_gff-0.7.1-py3-none-any.whl> 0 0 0 0 0 0 0 0 0 bcbio_gff-0.7.1-py3-none-any.whl> 0 0 0 0 0 0 0 0 0 bcbio_gff-0.7.1-py3-none-any.whl> 0 0 0 0 0 0 0 0 0 bcbio_gff-0.7.1-py3-none-any.whl> bcbio_gff-0.7.1-py3-none-any.whl> 0 0 0 0 0 0 0 0 0 bcbio_gff-0.7.1-py3-none-any.whl> 100 16008 100 16008 0 0 50404 0 0 bcbio_gff-0.7.1-py3-none-any.whl> 100 16008 100 16008 0 0 50389 0 0 bcbio_gff-0.7.1-py3-none-any.whl> 100 16008 100 16008 0 0 50376 0 0 building '/nix/store/09f1ikc0wr59c007ycx63v1vg2nkfsp8-python3.14-bcbio-gff-0.7.1.drv' python3.14-bcbio-gff-0.7.1> Sourcing python-remove-tests-dir-hook python3.14-bcbio-gff-0.7.1> Sourcing python-catch-conflicts-hook.sh python3.14-bcbio-gff-0.7.1> Sourcing python-remove-bin-bytecode-hook.sh python3.14-bcbio-gff-0.7.1> Sourcing wheel setup hook python3.14-bcbio-gff-0.7.1> Using wheelUnpackPhase python3.14-bcbio-gff-0.7.1> Sourcing python-runtime-deps-check-hook python3.14-bcbio-gff-0.7.1> Using pythonRuntimeDepsCheckHook python3.14-bcbio-gff-0.7.1> Sourcing pypa-install-hook python3.14-bcbio-gff-0.7.1> Using pypaInstallPhase python3.14-bcbio-gff-0.7.1> Sourcing python-imports-check-hook.sh python3.14-bcbio-gff-0.7.1> Using pythonImportsCheckPhase python3.14-bcbio-gff-0.7.1> Sourcing python-namespaces-hook python3.14-bcbio-gff-0.7.1> Sourcing python-catch-conflicts-hook.sh python3.14-bcbio-gff-0.7.1> Using checkPhaseThreadLimitHook python3.14-bcbio-gff-0.7.1> Running phase: unpackPhase python3.14-bcbio-gff-0.7.1> Executing wheelUnpackPhase python3.14-bcbio-gff-0.7.1> Finished executing wheelUnpackPhase python3.14-bcbio-gff-0.7.1> Running phase: patchPhase python3.14-bcbio-gff-0.7.1> Running phase: updateAutotoolsGnuConfigScriptsPhase python3.14-bcbio-gff-0.7.1> Running phase: configurePhase python3.14-bcbio-gff-0.7.1> no configure script, doing nothing python3.14-bcbio-gff-0.7.1> Running phase: buildPhase python3.14-bcbio-gff-0.7.1> no Makefile or custom buildPhase, doing nothing python3.14-bcbio-gff-0.7.1> Running phase: pythonRuntimeDepsCheckHook python3.14-bcbio-gff-0.7.1> Executing pythonRuntimeDepsCheck python3.14-bcbio-gff-0.7.1> Checking runtime dependencies for bcbio_gff-0.7.1-py3-none-any.whl python3.14-bcbio-gff-0.7.1> Finished executing pythonRuntimeDepsCheck python3.14-bcbio-gff-0.7.1> Running phase: installPhase python3.14-bcbio-gff-0.7.1> Executing pypaInstallPhase python3.14-bcbio-gff-0.7.1> /nix/store/5yxap4slp6hgh0h5gbjx9mdr2k7ajbr5-python3.14-bcbio-gff-0.7.1/lib/python3.14/site-packages/BCBio/GFF/GFFParser.py:71: SyntaxWarning: "\w" is an invalid escape sequence. Such sequences will not work in the future. Did you mean "\\w"? A raw string is also an option. python3.14-bcbio-gff-0.7.1> gff3_kw_pat = re.compile("\w+=") python3.14-bcbio-gff-0.7.1> /nix/store/5yxap4slp6hgh0h5gbjx9mdr2k7ajbr5-python3.14-bcbio-gff-0.7.1/lib/python3.14/site-packages/BCBio/GFF/GFFParser.py:71: SyntaxWarning: "\w" is an invalid escape sequence. Such sequences will not work in the future. Did you mean "\\w"? A raw string is also an option. python3.14-bcbio-gff-0.7.1> gff3_kw_pat = re.compile("\w+=") python3.14-bcbio-gff-0.7.1> Successfully installed bcbio_gff-0.7.1-py3-none-any.whl python3.14-bcbio-gff-0.7.1> Finished executing pypaInstallPhase python3.14-bcbio-gff-0.7.1> Running phase: pythonOutputDistPhase python3.14-bcbio-gff-0.7.1> Executing pythonOutputDistPhase python3.14-bcbio-gff-0.7.1> Finished executing pythonOutputDistPhase python3.14-bcbio-gff-0.7.1> Running phase: fixupPhase python3.14-bcbio-gff-0.7.1> shrinking RPATHs of ELF executables and libraries in /nix/store/5yxap4slp6hgh0h5gbjx9mdr2k7ajbr5-python3.14-bcbio-gff-0.7.1 python3.14-bcbio-gff-0.7.1> checking for references to /build/ in /nix/store/5yxap4slp6hgh0h5gbjx9mdr2k7ajbr5-python3.14-bcbio-gff-0.7.1... python3.14-bcbio-gff-0.7.1> patching script interpreter paths in /nix/store/5yxap4slp6hgh0h5gbjx9mdr2k7ajbr5-python3.14-bcbio-gff-0.7.1 python3.14-bcbio-gff-0.7.1> stripping (with command strip and flags -S -p) in /nix/store/5yxap4slp6hgh0h5gbjx9mdr2k7ajbr5-python3.14-bcbio-gff-0.7.1/lib python3.14-bcbio-gff-0.7.1> shrinking RPATHs of ELF executables and libraries in /nix/store/yxn9imr2dskm57l466ard20grprx0v20-python3.14-bcbio-gff-0.7.1-dist python3.14-bcbio-gff-0.7.1> checking for references to /build/ in /nix/store/yxn9imr2dskm57l466ard20grprx0v20-python3.14-bcbio-gff-0.7.1-dist... python3.14-bcbio-gff-0.7.1> patching script interpreter paths in /nix/store/yxn9imr2dskm57l466ard20grprx0v20-python3.14-bcbio-gff-0.7.1-dist python3.14-bcbio-gff-0.7.1> Executing pythonRemoveTestsDir python3.14-bcbio-gff-0.7.1> Finished executing pythonRemoveTestsDir python3.14-bcbio-gff-0.7.1> Running phase: pythonCatchConflictsPhase python3.14-bcbio-gff-0.7.1> Running phase: pythonRemoveBinBytecodePhase python3.14-bcbio-gff-0.7.1> Running phase: pythonImportsCheckPhase python3.14-bcbio-gff-0.7.1> Executing pythonImportsCheckPhase python3.14-bcbio-gff-0.7.1> Check whether the following modules can be imported: BCBio.GFF building '/nix/store/5kpam8mdmsb9dbczfs03vh9k076jqjj8-python3.14-dna-features-viewer-3.1.5.drv' python3.14-dna-features-viewer-3.1.5> Sourcing python-remove-tests-dir-hook python3.14-dna-features-viewer-3.1.5> Sourcing python-catch-conflicts-hook.sh python3.14-dna-features-viewer-3.1.5> Sourcing python-remove-bin-bytecode-hook.sh python3.14-dna-features-viewer-3.1.5> Sourcing pypa-build-hook python3.14-dna-features-viewer-3.1.5> Using pypaBuildPhase python3.14-dna-features-viewer-3.1.5> Sourcing python-runtime-deps-check-hook python3.14-dna-features-viewer-3.1.5> Using pythonRuntimeDepsCheckHook python3.14-dna-features-viewer-3.1.5> Sourcing pypa-install-hook python3.14-dna-features-viewer-3.1.5> Using pypaInstallPhase python3.14-dna-features-viewer-3.1.5> Sourcing python-imports-check-hook.sh python3.14-dna-features-viewer-3.1.5> Using pythonImportsCheckPhase python3.14-dna-features-viewer-3.1.5> Sourcing python-metadata-check-hook.sh python3.14-dna-features-viewer-3.1.5> Using pythonMetadataCheckPhase python3.14-dna-features-viewer-3.1.5> Sourcing python-namespaces-hook python3.14-dna-features-viewer-3.1.5> Sourcing python-catch-conflicts-hook.sh python3.14-dna-features-viewer-3.1.5> Sourcing pytest-check-hook python3.14-dna-features-viewer-3.1.5> Using pytestCheckPhase python3.14-dna-features-viewer-3.1.5> Using checkPhaseThreadLimitHook python3.14-dna-features-viewer-3.1.5> Running phase: unpackPhase python3.14-dna-features-viewer-3.1.5> unpacking source archive /nix/store/axgdq6icxv756ga4nwikpwms4gmds98g-source python3.14-dna-features-viewer-3.1.5> source root is source python3.14-dna-features-viewer-3.1.5> setting SOURCE_DATE_EPOCH to timestamp 315619200 of file "source/tests/test_biotools.py" python3.14-dna-features-viewer-3.1.5> Running phase: patchPhase python3.14-dna-features-viewer-3.1.5> Running phase: updateAutotoolsGnuConfigScriptsPhase python3.14-dna-features-viewer-3.1.5> Running phase: configurePhase python3.14-dna-features-viewer-3.1.5> no configure script, doing nothing python3.14-dna-features-viewer-3.1.5> Running phase: buildPhase python3.14-dna-features-viewer-3.1.5> Executing pypaBuildPhase python3.14-dna-features-viewer-3.1.5> Creating a wheel... python3.14-dna-features-viewer-3.1.5> pypa build flags: --no-isolation --outdir dist/ --wheel python3.14-dna-features-viewer-3.1.5> * Getting build dependencies for wheel... python3.14-dna-features-viewer-3.1.5> running egg_info python3.14-dna-features-viewer-3.1.5> creating dna_features_viewer.egg-info python3.14-dna-features-viewer-3.1.5> writing dna_features_viewer.egg-info/PKG-INFO python3.14-dna-features-viewer-3.1.5> writing dependency_links to dna_features_viewer.egg-info/dependency_links.txt python3.14-dna-features-viewer-3.1.5> writing requirements to dna_features_viewer.egg-info/requires.txt python3.14-dna-features-viewer-3.1.5> writing top-level names to dna_features_viewer.egg-info/top_level.txt python3.14-dna-features-viewer-3.1.5> writing manifest file 'dna_features_viewer.egg-info/SOURCES.txt' python3.14-dna-features-viewer-3.1.5> reading manifest file 'dna_features_viewer.egg-info/SOURCES.txt' python3.14-dna-features-viewer-3.1.5> adding license file 'LICENSE' python3.14-dna-features-viewer-3.1.5> writing manifest file 'dna_features_viewer.egg-info/SOURCES.txt' python3.14-dna-features-viewer-3.1.5> * Building wheel... python3.14-dna-features-viewer-3.1.5> running bdist_wheel python3.14-dna-features-viewer-3.1.5> running build python3.14-dna-features-viewer-3.1.5> running build_py python3.14-dna-features-viewer-3.1.5> creating build/lib/dna_features_viewer python3.14-dna-features-viewer-3.1.5> copying dna_features_viewer/GraphicFeature.py -> build/lib/dna_features_viewer python3.14-dna-features-viewer-3.1.5> copying dna_features_viewer/__init__.py -> build/lib/dna_features_viewer python3.14-dna-features-viewer-3.1.5> copying dna_features_viewer/biotools.py -> build/lib/dna_features_viewer python3.14-dna-features-viewer-3.1.5> copying dna_features_viewer/compute_features_levels.py -> build/lib/dna_features_viewer python3.14-dna-features-viewer-3.1.5> copying dna_features_viewer/version.py -> build/lib/dna_features_viewer python3.14-dna-features-viewer-3.1.5> creating build/lib/dna_features_viewer/BiopythonTranslator python3.14-dna-features-viewer-3.1.5> copying dna_features_viewer/BiopythonTranslator/BiopythonTranslator.py -> build/lib/dna_features_viewer/BiopythonTranslator python3.14-dna-features-viewer-3.1.5> copying dna_features_viewer/BiopythonTranslator/BiopythonTranslatorBase.py -> build/lib/dna_features_viewer/BiopythonTranslator python3.14-dna-features-viewer-3.1.5> copying dna_features_viewer/BiopythonTranslator/BlackBoxlessLabelTranslator.py -> build/lib/dna_features_viewer/BiopythonTranslator python3.14-dna-features-viewer-3.1.5> copying dna_features_viewer/BiopythonTranslator/__init__.py -> build/lib/dna_features_viewer/BiopythonTranslator python3.14-dna-features-viewer-3.1.5> creating build/lib/dna_features_viewer/CircularGraphicRecord python3.14-dna-features-viewer-3.1.5> copying dna_features_viewer/CircularGraphicRecord/ArrowWedge.py -> build/lib/dna_features_viewer/CircularGraphicRecord python3.14-dna-features-viewer-3.1.5> copying dna_features_viewer/CircularGraphicRecord/CircularGraphicRecord.py -> build/lib/dna_features_viewer/CircularGraphicRecord python3.14-dna-features-viewer-3.1.5> copying dna_features_viewer/CircularGraphicRecord/__init__.py -> build/lib/dna_features_viewer/CircularGraphicRecord python3.14-dna-features-viewer-3.1.5> creating build/lib/dna_features_viewer/GraphicRecord python3.14-dna-features-viewer-3.1.5> copying dna_features_viewer/GraphicRecord/BokehPlottableMixin.py -> build/lib/dna_features_viewer/GraphicRecord python3.14-dna-features-viewer-3.1.5> copying dna_features_viewer/GraphicRecord/GraphicRecord.py -> build/lib/dna_features_viewer/GraphicRecord python3.14-dna-features-viewer-3.1.5> copying dna_features_viewer/GraphicRecord/MatplotlibPlottableMixin.py -> build/lib/dna_features_viewer/GraphicRecord python3.14-dna-features-viewer-3.1.5> copying dna_features_viewer/GraphicRecord/MultilinePlottableMixin.py -> build/lib/dna_features_viewer/GraphicRecord python3.14-dna-features-viewer-3.1.5> copying dna_features_viewer/GraphicRecord/SequenceAndTranslationMixin.py -> build/lib/dna_features_viewer/GraphicRecord python3.14-dna-features-viewer-3.1.5> copying dna_features_viewer/GraphicRecord/__init__.py -> build/lib/dna_features_viewer/GraphicRecord python3.14-dna-features-viewer-3.1.5> running egg_info python3.14-dna-features-viewer-3.1.5> writing dna_features_viewer.egg-info/PKG-INFO python3.14-dna-features-viewer-3.1.5> writing dependency_links to dna_features_viewer.egg-info/dependency_links.txt python3.14-dna-features-viewer-3.1.5> writing requirements to dna_features_viewer.egg-info/requires.txt python3.14-dna-features-viewer-3.1.5> writing top-level names to dna_features_viewer.egg-info/top_level.txt python3.14-dna-features-viewer-3.1.5> reading manifest file 'dna_features_viewer.egg-info/SOURCES.txt' python3.14-dna-features-viewer-3.1.5> adding license file 'LICENSE' python3.14-dna-features-viewer-3.1.5> writing manifest file 'dna_features_viewer.egg-info/SOURCES.txt' python3.14-dna-features-viewer-3.1.5> installing to build/bdist.linux-x86_64/wheel python3.14-dna-features-viewer-3.1.5> running install python3.14-dna-features-viewer-3.1.5> running install_lib python3.14-dna-features-viewer-3.1.5> creating build/bdist.linux-x86_64/wheel python3.14-dna-features-viewer-3.1.5> creating build/bdist.linux-x86_64/wheel/dna_features_viewer python3.14-dna-features-viewer-3.1.5> copying build/lib/dna_features_viewer/GraphicFeature.py -> build/bdist.linux-x86_64/wheel/./dna_features_viewer python3.14-dna-features-viewer-3.1.5> copying build/lib/dna_features_viewer/__init__.py -> build/bdist.linux-x86_64/wheel/./dna_features_viewer python3.14-dna-features-viewer-3.1.5> copying build/lib/dna_features_viewer/biotools.py -> build/bdist.linux-x86_64/wheel/./dna_features_viewer python3.14-dna-features-viewer-3.1.5> copying build/lib/dna_features_viewer/compute_features_levels.py -> build/bdist.linux-x86_64/wheel/./dna_features_viewer python3.14-dna-features-viewer-3.1.5> copying build/lib/dna_features_viewer/version.py -> build/bdist.linux-x86_64/wheel/./dna_features_viewer python3.14-dna-features-viewer-3.1.5> creating build/bdist.linux-x86_64/wheel/dna_features_viewer/BiopythonTranslator python3.14-dna-features-viewer-3.1.5> copying build/lib/dna_features_viewer/BiopythonTranslator/BiopythonTranslator.py -> build/bdist.linux-x86_64/wheel/./dna_features_viewer/BiopythonTranslator python3.14-dna-features-viewer-3.1.5> copying build/lib/dna_features_viewer/BiopythonTranslator/BiopythonTranslatorBase.py -> build/bdist.linux-x86_64/wheel/./dna_features_viewer/BiopythonTranslator python3.14-dna-features-viewer-3.1.5> copying build/lib/dna_features_viewer/BiopythonTranslator/BlackBoxlessLabelTranslator.py -> build/bdist.linux-x86_64/wheel/./dna_features_viewer/BiopythonTranslator python3.14-dna-features-viewer-3.1.5> copying build/lib/dna_features_viewer/BiopythonTranslator/__init__.py -> build/bdist.linux-x86_64/wheel/./dna_features_viewer/BiopythonTranslator python3.14-dna-features-viewer-3.1.5> creating build/bdist.linux-x86_64/wheel/dna_features_viewer/CircularGraphicRecord python3.14-dna-features-viewer-3.1.5> copying build/lib/dna_features_viewer/CircularGraphicRecord/ArrowWedge.py -> build/bdist.linux-x86_64/wheel/./dna_features_viewer/CircularGraphicRecord python3.14-dna-features-viewer-3.1.5> copying build/lib/dna_features_viewer/CircularGraphicRecord/CircularGraphicRecord.py -> build/bdist.linux-x86_64/wheel/./dna_features_viewer/CircularGraphicRecord python3.14-dna-features-viewer-3.1.5> copying build/lib/dna_features_viewer/CircularGraphicRecord/__init__.py -> build/bdist.linux-x86_64/wheel/./dna_features_viewer/CircularGraphicRecord python3.14-dna-features-viewer-3.1.5> creating build/bdist.linux-x86_64/wheel/dna_features_viewer/GraphicRecord python3.14-dna-features-viewer-3.1.5> copying build/lib/dna_features_viewer/GraphicRecord/BokehPlottableMixin.py -> build/bdist.linux-x86_64/wheel/./dna_features_viewer/GraphicRecord python3.14-dna-features-viewer-3.1.5> copying build/lib/dna_features_viewer/GraphicRecord/GraphicRecord.py -> build/bdist.linux-x86_64/wheel/./dna_features_viewer/GraphicRecord python3.14-dna-features-viewer-3.1.5> copying build/lib/dna_features_viewer/GraphicRecord/MatplotlibPlottableMixin.py -> build/bdist.linux-x86_64/wheel/./dna_features_viewer/GraphicRecord python3.14-dna-features-viewer-3.1.5> copying build/lib/dna_features_viewer/GraphicRecord/MultilinePlottableMixin.py -> build/bdist.linux-x86_64/wheel/./dna_features_viewer/GraphicRecord python3.14-dna-features-viewer-3.1.5> copying build/lib/dna_features_viewer/GraphicRecord/SequenceAndTranslationMixin.py -> build/bdist.linux-x86_64/wheel/./dna_features_viewer/GraphicRecord python3.14-dna-features-viewer-3.1.5> copying build/lib/dna_features_viewer/GraphicRecord/__init__.py -> build/bdist.linux-x86_64/wheel/./dna_features_viewer/GraphicRecord python3.14-dna-features-viewer-3.1.5> running install_egg_info python3.14-dna-features-viewer-3.1.5> Copying dna_features_viewer.egg-info to build/bdist.linux-x86_64/wheel/./dna_features_viewer-3.1.5-py3.14.egg-info python3.14-dna-features-viewer-3.1.5> running install_scripts python3.14-dna-features-viewer-3.1.5> creating build/bdist.linux-x86_64/wheel/dna_features_viewer-3.1.5.dist-info/WHEEL python3.14-dna-features-viewer-3.1.5> creating '/build/source/dist/.tmp-_omn0ujh/dna_features_viewer-3.1.5-py3-none-any.whl' and adding 'build/bdist.linux-x86_64/wheel' to it python3.14-dna-features-viewer-3.1.5> adding 'dna_features_viewer/GraphicFeature.py' python3.14-dna-features-viewer-3.1.5> adding 'dna_features_viewer/__init__.py' python3.14-dna-features-viewer-3.1.5> adding 'dna_features_viewer/biotools.py' python3.14-dna-features-viewer-3.1.5> adding 'dna_features_viewer/compute_features_levels.py' python3.14-dna-features-viewer-3.1.5> adding 'dna_features_viewer/version.py' python3.14-dna-features-viewer-3.1.5> adding 'dna_features_viewer/BiopythonTranslator/BiopythonTranslator.py' python3.14-dna-features-viewer-3.1.5> adding 'dna_features_viewer/BiopythonTranslator/BiopythonTranslatorBase.py' python3.14-dna-features-viewer-3.1.5> adding 'dna_features_viewer/BiopythonTranslator/BlackBoxlessLabelTranslator.py' python3.14-dna-features-viewer-3.1.5> adding 'dna_features_viewer/BiopythonTranslator/__init__.py' python3.14-dna-features-viewer-3.1.5> adding 'dna_features_viewer/CircularGraphicRecord/ArrowWedge.py' python3.14-dna-features-viewer-3.1.5> adding 'dna_features_viewer/CircularGraphicRecord/CircularGraphicRecord.py' python3.14-dna-features-viewer-3.1.5> adding 'dna_features_viewer/CircularGraphicRecord/__init__.py' python3.14-dna-features-viewer-3.1.5> adding 'dna_features_viewer/GraphicRecord/BokehPlottableMixin.py' python3.14-dna-features-viewer-3.1.5> adding 'dna_features_viewer/GraphicRecord/GraphicRecord.py' python3.14-dna-features-viewer-3.1.5> adding 'dna_features_viewer/GraphicRecord/MatplotlibPlottableMixin.py' python3.14-dna-features-viewer-3.1.5> adding 'dna_features_viewer/GraphicRecord/MultilinePlottableMixin.py' python3.14-dna-features-viewer-3.1.5> adding 'dna_features_viewer/GraphicRecord/SequenceAndTranslationMixin.py' python3.14-dna-features-viewer-3.1.5> adding 'dna_features_viewer/GraphicRecord/__init__.py' python3.14-dna-features-viewer-3.1.5> adding 'dna_features_viewer-3.1.5.dist-info/licenses/LICENSE' python3.14-dna-features-viewer-3.1.5> adding 'dna_features_viewer-3.1.5.dist-info/METADATA' python3.14-dna-features-viewer-3.1.5> adding 'dna_features_viewer-3.1.5.dist-info/WHEEL' python3.14-dna-features-viewer-3.1.5> adding 'dna_features_viewer-3.1.5.dist-info/top_level.txt' python3.14-dna-features-viewer-3.1.5> adding 'dna_features_viewer-3.1.5.dist-info/RECORD' python3.14-dna-features-viewer-3.1.5> removing build/bdist.linux-x86_64/wheel python3.14-dna-features-viewer-3.1.5> Successfully built dna_features_viewer-3.1.5-py3-none-any.whl python3.14-dna-features-viewer-3.1.5> Finished creating a wheel... python3.14-dna-features-viewer-3.1.5> Finished executing pypaBuildPhase python3.14-dna-features-viewer-3.1.5> Running phase: pythonRuntimeDepsCheckHook python3.14-dna-features-viewer-3.1.5> Executing pythonRuntimeDepsCheck python3.14-dna-features-viewer-3.1.5> Checking runtime dependencies for dna_features_viewer-3.1.5-py3-none-any.whl python3.14-dna-features-viewer-3.1.5> Finished executing pythonRuntimeDepsCheck python3.14-dna-features-viewer-3.1.5> Running phase: installPhase python3.14-dna-features-viewer-3.1.5> Executing pypaInstallPhase python3.14-dna-features-viewer-3.1.5> Successfully installed dna_features_viewer-3.1.5-py3-none-any.whl python3.14-dna-features-viewer-3.1.5> Finished executing pypaInstallPhase python3.14-dna-features-viewer-3.1.5> Running phase: pythonOutputDistPhase python3.14-dna-features-viewer-3.1.5> Executing pythonOutputDistPhase python3.14-dna-features-viewer-3.1.5> Finished executing pythonOutputDistPhase python3.14-dna-features-viewer-3.1.5> Running phase: fixupPhase python3.14-dna-features-viewer-3.1.5> shrinking RPATHs of ELF executables and libraries in /nix/store/8md5i6b3dyjkf6n9v14fqljz2ihz8cxy-python3.14-dna-features-viewer-3.1.5 python3.14-dna-features-viewer-3.1.5> checking for references to /build/ in /nix/store/8md5i6b3dyjkf6n9v14fqljz2ihz8cxy-python3.14-dna-features-viewer-3.1.5... python3.14-dna-features-viewer-3.1.5> patching script interpreter paths in /nix/store/8md5i6b3dyjkf6n9v14fqljz2ihz8cxy-python3.14-dna-features-viewer-3.1.5 python3.14-dna-features-viewer-3.1.5> stripping (with command strip and flags -S -p) in /nix/store/8md5i6b3dyjkf6n9v14fqljz2ihz8cxy-python3.14-dna-features-viewer-3.1.5/lib python3.14-dna-features-viewer-3.1.5> shrinking RPATHs of ELF executables and libraries in /nix/store/1lmi5xpdk2zsdgbyb0zxk5hlryxbxv48-python3.14-dna-features-viewer-3.1.5-dist python3.14-dna-features-viewer-3.1.5> checking for references to /build/ in /nix/store/1lmi5xpdk2zsdgbyb0zxk5hlryxbxv48-python3.14-dna-features-viewer-3.1.5-dist... python3.14-dna-features-viewer-3.1.5> patching script interpreter paths in /nix/store/1lmi5xpdk2zsdgbyb0zxk5hlryxbxv48-python3.14-dna-features-viewer-3.1.5-dist python3.14-dna-features-viewer-3.1.5> Executing pythonRemoveTestsDir python3.14-dna-features-viewer-3.1.5> Finished executing pythonRemoveTestsDir python3.14-dna-features-viewer-3.1.5> Running phase: installCheckPhase python3.14-dna-features-viewer-3.1.5> setting known thread variables to default: 1 python3.14-dna-features-viewer-3.1.5> OMP_NUM_THREADS=1 OPENBLAS_NUM_THREADS=1 MKL_NUM_THREADS=1 BLIS_NUM_THREADS=1 VECLIB_MAXIMUM_THREADS=1 NUMBA_NUM_THREADS=1 NUMEXPR_NUM_THREADS=1 python3.14-dna-features-viewer-3.1.5> no Makefile or custom installCheckPhase, doing nothing python3.14-dna-features-viewer-3.1.5> Running phase: pythonCatchConflictsPhase python3.14-dna-features-viewer-3.1.5> Running phase: pythonRemoveBinBytecodePhase python3.14-dna-features-viewer-3.1.5> Running phase: pythonImportsCheckPhase python3.14-dna-features-viewer-3.1.5> Executing pythonImportsCheckPhase python3.14-dna-features-viewer-3.1.5> Check whether the following modules can be imported: dna_features_viewer python3.14-dna-features-viewer-3.1.5> mkdir -p failed for path /homeless-shelter/.config/matplotlib: [Errno 13] Permission denied: '/homeless-shelter' python3.14-dna-features-viewer-3.1.5> Matplotlib created a temporary cache directory at /build/matplotlib-7sq9cjik because there was an issue with the default path ({configdir}); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing. python3.14-dna-features-viewer-3.1.5> Running phase: pythonMetadataCheckPhase python3.14-dna-features-viewer-3.1.5> Executing pythonMetadataCheckPhase python3.14-dna-features-viewer-3.1.5> Running phase: pytestCheckPhase python3.14-dna-features-viewer-3.1.5> Executing pytestCheckPhase python3.14-dna-features-viewer-3.1.5> setting known thread variables to default: 1 python3.14-dna-features-viewer-3.1.5> OMP_NUM_THREADS=1 OPENBLAS_NUM_THREADS=1 MKL_NUM_THREADS=1 BLIS_NUM_THREADS=1 VECLIB_MAXIMUM_THREADS=1 NUMBA_NUM_THREADS=1 NUMEXPR_NUM_THREADS=1 python3.14-dna-features-viewer-3.1.5> pytest flags: -m pytest tests python3.14-dna-features-viewer-3.1.5> ============================= test session starts ============================== python3.14-dna-features-viewer-3.1.5> platform linux -- Python 3.14.7, pytest-9.1.1, pluggy-1.6.0 python3.14-dna-features-viewer-3.1.5> rootdir: /build/source python3.14-dna-features-viewer-3.1.5> configfile: pyproject.toml python3.14-dna-features-viewer-3.1.5> collected 20 items python3.14-dna-features-viewer-3.1.5> python3.14-dna-features-viewer-3.1.5> tests/test_basics.py .................. [ 90%] python3.14-dna-features-viewer-3.1.5> tests/test_biotools.py .. [100%] python3.14-dna-features-viewer-3.1.5> python3.14-dna-features-viewer-3.1.5> ============================= 20 passed in 24.91s ============================== python3.14-dna-features-viewer-3.1.5> Finished executing pytestCheckPhase python3.14-dna-features-viewer-3.1.5> pytestCheckPhase completed in 34 seconds python3.14-dna-features-viewer-3.1.5> Running phase: pytestcachePhase python3.14-dna-features-viewer-3.1.5> Running phase: pytestRemoveBytecodePhase post-build step Route build to niks3: ok Pushing SBEE-Lab/bioinformatics-toolkits to https://niks3.sjanglab.org time=2026-09-05T21:14:37.737+09:00 level=INFO msg="Uploading 17 paths to niks3.sjanglab.org (74 already cached)" time=2026-09-05T21:14:37.737+09:00 level=INFO msg="Uploading zn1jsv5nk7c89cacwk6ffyda5ndm7da0-libimagequant-4.4.1 (10.7MB)" time=2026-09-05T21:14:37.737+09:00 level=INFO msg="Uploading 8md5i6b3dyjkf6n9v14fqljz2ihz8cxy-python3.14-dna-features-viewer-3.1.5 (292.1KB)" time=2026-09-05T21:14:37.737+09:00 level=INFO msg="Uploading 2fb340c4r1zp6bp3i7mary0582vk0ra2-python3.14-cycler-0.12.1 (77.1KB)" time=2026-09-05T21:14:37.738+09:00 level=INFO msg="Uploading dpvgb8s4f0wp55x76w1fp96pb3kljk30-tk-9.0.4 (3.6MB)" time=2026-09-05T21:14:37.738+09:00 level=INFO msg="Uploading 2fwiimdk8289pp3fd0k413dyj05q85ll-python3.14-pillow-12.3.0 (5.1MB)" time=2026-09-05T21:14:37.738+09:00 level=INFO msg="Uploading 8vw8s7qx59v3df9smlkbflr31wq2y12i-tcl-9.0.4 (11.6MB)" time=2026-09-05T21:14:37.738+09:00 level=INFO msg="Uploading knqn36sw52d4hbrbnd8q73n32lnk66d2-python3.14-tkinter-3.14.7 (1.2MB)" time=2026-09-05T21:14:37.738+09:00 level=INFO msg="Uploading xzrd8n8xvn4bw7m48mfa6fmwc2qjygc6-python3.14-pyparsing-3.3.2 (1.6MB)" time=2026-09-05T21:14:37.738+09:00 level=INFO msg="Uploading f6s9il9hjwvrfzdvvxingnmj158jv1v0-qhull-2020.2 (6.5MB)" time=2026-09-05T21:14:37.738+09:00 level=INFO msg="Uploading 5yxap4slp6hgh0h5gbjx9mdr2k7ajbr5-python3.14-bcbio-gff-0.7.1 (176.5KB)" time=2026-09-05T21:14:37.738+09:00 level=INFO msg="Uploading 2q5k90r1cc528pan3d2lakg5n6k4kla7-python3.14-kiwisolver-1.5.0 (262.6KB)" time=2026-09-05T21:14:37.738+09:00 level=INFO msg="Uploading g6b5hvjcnsca8nfga7j4fym4ifv7mrm5-python3.14-contourpy-1.3.3 (1.4MB)" time=2026-09-05T21:14:37.741+09:00 level=INFO msg="Uploading wjir9hqdc5z6fi457jw09nzxsk0aw27j-python3.14-fonttools-4.63.0 (15.0MB)" time=2026-09-05T21:14:37.741+09:00 level=INFO msg="Uploading jmdg9cswwpkbaysw69qghg04gk8dxa99-python3.14-python-dateutil-2.9.0.post0 (1.0MB)" time=2026-09-05T21:14:37.742+09:00 level=INFO msg="Uploading yizz72bdc775f2lcas34c7xwsmvgzjqx-python3.14-six-1.17.0 (124.3KB)" time=2026-09-05T21:14:37.738+09:00 level=INFO msg="Uploading bvw8nys1ibsb5jck0bfndy5b6v2vmfsl-tk-9.0.4-man (953.5KB)" time=2026-09-05T21:14:37.742+09:00 level=INFO msg="Uploading izdi4wqm0rrc4srsq9gcazb6mv5ml2v1-python3.14-matplotlib-3.11.1 (41.4MB)" time=2026-09-05T21:14:41.406+09:00 level=INFO msg="Uploading 17 narinfos" time=2026-09-05T21:14:42.258+09:00 level=INFO msg="Upload complete. 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