these 2 derivations will be built:
  /nix/store/2d1j4fpz9as1jv7rwnl0npjhpbp844kn-pydna-5.5.16.tar.gz.drv
  /nix/store/0gh0jgpi3m4q6rsx0bj7qm4hjm7g8ala-python3.14-pydna-5.5.16.drv
these 20 paths will be fetched (7.8 MiB download, 24.9 MiB unpacked):
  /nix/store/pnkff21wahk6b6qmz04d5h5a1a2hcv4m-curl-8.21.0
  /nix/store/0fr5aijq41mvd118qzbh5p6ndfc9p0pv-curl-8.21.0-bin
  /nix/store/cgc2kkyzjz6315sczgqw1hv8xgcb3n16-curl-8.21.0-dev
  /nix/store/a6nipvngl39xcd80xndc98ykx2p72skc-curl-8.21.0-man
  /nix/store/67iqvbr3jha6vpv2lsabwvh32qm2ngk5-krb5-1.22.2
  /nix/store/kkp0frqvy2jxjqjghpbcip23xn4ajcs0-krb5-1.22.2-dev
  /nix/store/5gdpafl8dkx184spgfv8pa969x22vnbm-krb5-1.22.2-lib
  /nix/store/bxyfpwg13x1806lk3mjqgfxj6v15rg0m-libssh2-1.11.1
  /nix/store/bxvlbwh29k9app0b5ypivfcfwdyqyd80-libssh2-1.11.1-dev
  /nix/store/7xn3qffdvfjq1nxi1ya9qrqs15x279xg-mirrors-list
  /nix/store/5w5p1jdhi1j992dnp61hi56arvix2zi6-nghttp2-1.69.0
  /nix/store/rl7539dfifk1kvlgvr36klv7pr7kqcrs-nghttp2-1.69.0-dev
  /nix/store/565jvpqws8qimawxq3glnpk52f21zygd-nghttp2-1.69.0-lib
  /nix/store/ry0iipbxrpmh0wr0l66bg2w6v2nqa0gw-openssl-3.6.3
  /nix/store/pdd049jvlp94zqs4j9kphrpgzcvdqp9c-openssl-3.6.3-bin
  /nix/store/c2cvmmsg2wz2wiszc1ywj5vr4c2k0ldz-openssl-3.6.3-dev
  /nix/store/329bcy0cdsnc82fyafrc8bj33ibxzpnd-python-relax-deps-hook
  /nix/store/fr9lxd97am8pjjgxxfwqaawrvh1fsfky-python3.14-dunamai-1.25.0
  /nix/store/jgjqjbyajsbmly5jag4k5smczpxrrpry-python3.14-poetry-core-2.4.1
  /nix/store/l1819aqdvrskwnglvqxqfa33vdilijqj-python3.14-poetry-dynamic-versioning-1.9.1
building '/nix/store/n4rljcgysgwypq8ap278z6lk59rlmrn5-pydna-5.5.16.tar.gz.drv'
pydna-5.5.16.tar.gz> structuredAttrs is enabled
pydna-5.5.16.tar.gz> 
pydna-5.5.16.tar.gz> trying https://files.pythonhosted.org/packages/source/p/pydna/pydna-5.5.16.tar.gz
pydna-5.5.16.tar.gz>   % Total    % Received % Xferd  Average Speed  Time    Time    Time   Current
pydna-5.5.16.tar.gz>                                  Dload  Upload  Total   Spent   Left   Speed
pydna-5.5.16.tar.gz>   0      0   0      0   0      0      0      0                              0
pydna-5.5.16.tar.gz> 100 185.3k 100 185.3k   0      0 468.0k      0                              0
building '/nix/store/0gh0jgpi3m4q6rsx0bj7qm4hjm7g8ala-python3.14-pydna-5.5.16.drv'
python3.14-pydna-5.5.16> Sourcing python-remove-tests-dir-hook
python3.14-pydna-5.5.16> Sourcing python-catch-conflicts-hook.sh
python3.14-pydna-5.5.16> Sourcing python-remove-bin-bytecode-hook.sh
python3.14-pydna-5.5.16> Sourcing pypa-build-hook
python3.14-pydna-5.5.16> Using pypaBuildPhase
python3.14-pydna-5.5.16> Sourcing python-runtime-deps-check-hook
python3.14-pydna-5.5.16> Using pythonRuntimeDepsCheckHook
python3.14-pydna-5.5.16> Sourcing pypa-install-hook
python3.14-pydna-5.5.16> Using pypaInstallPhase
python3.14-pydna-5.5.16> Sourcing python-imports-check-hook.sh
python3.14-pydna-5.5.16> Using pythonImportsCheckPhase
python3.14-pydna-5.5.16> Sourcing python-metadata-check-hook.sh
python3.14-pydna-5.5.16> Using pythonMetadataCheckPhase
python3.14-pydna-5.5.16> Sourcing python-namespaces-hook
python3.14-pydna-5.5.16> Sourcing python-catch-conflicts-hook.sh
python3.14-pydna-5.5.16> Using checkPhaseThreadLimitHook
python3.14-pydna-5.5.16> Running phase: unpackPhase
python3.14-pydna-5.5.16> unpacking source archive /nix/store/rx6ia5j881xwiajjd5j0nznxsy38blqx-pydna-5.5.16.tar.gz
python3.14-pydna-5.5.16> source root is pydna-5.5.16
python3.14-pydna-5.5.16> setting SOURCE_DATE_EPOCH to timestamp 315619200 of file "pydna-5.5.16/src/pydna/utils.py"
python3.14-pydna-5.5.16> Running phase: patchPhase
python3.14-pydna-5.5.16> Running phase: updateAutotoolsGnuConfigScriptsPhase
python3.14-pydna-5.5.16> Running phase: configurePhase
python3.14-pydna-5.5.16> no configure script, doing nothing
python3.14-pydna-5.5.16> Running phase: buildPhase
python3.14-pydna-5.5.16> Executing pypaBuildPhase
python3.14-pydna-5.5.16> Setting POETRY_DYNAMIC_VERSIONING_BYPASS to 5.5.16
python3.14-pydna-5.5.16> Creating a wheel...
python3.14-pydna-5.5.16> pypa build flags: --no-isolation --outdir dist/ --wheel
python3.14-pydna-5.5.16> * Getting build dependencies for wheel...
python3.14-pydna-5.5.16> * Building wheel...
python3.14-pydna-5.5.16> Successfully built pydna-5.5.16-py3-none-any.whl
python3.14-pydna-5.5.16> Finished creating a wheel...
python3.14-pydna-5.5.16> /build/pydna-5.5.16/dist /build/pydna-5.5.16
python3.14-pydna-5.5.16> Unpacking to: unpacked/pydna-5.5.16...OK
python3.14-pydna-5.5.16> Repacking wheel as ./pydna-5.5.16-py3-none-any.whl...OK
python3.14-pydna-5.5.16> /build/pydna-5.5.16
python3.14-pydna-5.5.16> Finished executing pypaBuildPhase
python3.14-pydna-5.5.16> Running phase: pythonRuntimeDepsCheckHook
python3.14-pydna-5.5.16> Executing pythonRuntimeDepsCheck
python3.14-pydna-5.5.16> Checking runtime dependencies for pydna-5.5.16-py3-none-any.whl
python3.14-pydna-5.5.16> Finished executing pythonRuntimeDepsCheck
python3.14-pydna-5.5.16> Running phase: installPhase
python3.14-pydna-5.5.16> Executing pypaInstallPhase
python3.14-pydna-5.5.16> Successfully installed pydna-5.5.16-py3-none-any.whl
python3.14-pydna-5.5.16> Finished executing pypaInstallPhase
python3.14-pydna-5.5.16> Running phase: pythonOutputDistPhase
python3.14-pydna-5.5.16> Executing pythonOutputDistPhase
python3.14-pydna-5.5.16> Finished executing pythonOutputDistPhase
python3.14-pydna-5.5.16> Running phase: fixupPhase
python3.14-pydna-5.5.16> shrinking RPATHs of ELF executables and libraries in /nix/store/2xks6mab4g6dwvqsn0vjld8if84zjvhg-python3.14-pydna-5.5.16
python3.14-pydna-5.5.16> checking for references to /build/ in /nix/store/2xks6mab4g6dwvqsn0vjld8if84zjvhg-python3.14-pydna-5.5.16...
python3.14-pydna-5.5.16> patching script interpreter paths in /nix/store/2xks6mab4g6dwvqsn0vjld8if84zjvhg-python3.14-pydna-5.5.16
python3.14-pydna-5.5.16> /nix/store/2xks6mab4g6dwvqsn0vjld8if84zjvhg-python3.14-pydna-5.5.16/lib/python3.14/site-packages/pydna/amplicon.py: interpreter directive changed from "#!/usr/bin/env python3" to "/nix/store/gxzhl7aaiid7zp3y47jqqiq7zg5mqpwp-python3-3.14.6/bin/python3"
python3.14-pydna-5.5.16> /nix/store/2xks6mab4g6dwvqsn0vjld8if84zjvhg-python3.14-pydna-5.5.16/lib/python3.14/site-packages/pydna/fakeseq.py: interpreter directive changed from "#!/usr/bin/env python3" to "/nix/store/gxzhl7aaiid7zp3y47jqqiq7zg5mqpwp-python3-3.14.6/bin/python3"
python3.14-pydna-5.5.16> /nix/store/2xks6mab4g6dwvqsn0vjld8if84zjvhg-python3.14-pydna-5.5.16/lib/python3.14/site-packages/pydna/gel.py: interpreter directive changed from "#!/usr/bin/env python3" to "/nix/store/gxzhl7aaiid7zp3y47jqqiq7zg5mqpwp-python3-3.14.6/bin/python3"
python3.14-pydna-5.5.16> /nix/store/2xks6mab4g6dwvqsn0vjld8if84zjvhg-python3.14-pydna-5.5.16/lib/python3.14/site-packages/pydna/ladders.py: interpreter directive changed from "#!/usr/bin/env python3" to "/nix/store/gxzhl7aaiid7zp3y47jqqiq7zg5mqpwp-python3-3.14.6/bin/python3"
python3.14-pydna-5.5.16> /nix/store/2xks6mab4g6dwvqsn0vjld8if84zjvhg-python3.14-pydna-5.5.16/lib/python3.14/site-packages/pydna/seqrecord.py: interpreter directive changed from "#!/usr/bin/env python3" to "/nix/store/gxzhl7aaiid7zp3y47jqqiq7zg5mqpwp-python3-3.14.6/bin/python3"
python3.14-pydna-5.5.16> stripping (with command strip and flags -S -p) in  /nix/store/2xks6mab4g6dwvqsn0vjld8if84zjvhg-python3.14-pydna-5.5.16/lib
python3.14-pydna-5.5.16> shrinking RPATHs of ELF executables and libraries in /nix/store/c6nhwyaxc1y29c6zkd8kp76j6g0hgkyc-python3.14-pydna-5.5.16-dist
python3.14-pydna-5.5.16> checking for references to /build/ in /nix/store/c6nhwyaxc1y29c6zkd8kp76j6g0hgkyc-python3.14-pydna-5.5.16-dist...
python3.14-pydna-5.5.16> patching script interpreter paths in /nix/store/c6nhwyaxc1y29c6zkd8kp76j6g0hgkyc-python3.14-pydna-5.5.16-dist
python3.14-pydna-5.5.16> Executing pythonRemoveTestsDir
python3.14-pydna-5.5.16> Finished executing pythonRemoveTestsDir
python3.14-pydna-5.5.16> Running phase: pythonCatchConflictsPhase
python3.14-pydna-5.5.16> Running phase: pythonRemoveBinBytecodePhase
python3.14-pydna-5.5.16> Running phase: pythonImportsCheckPhase
python3.14-pydna-5.5.16> Executing pythonImportsCheckPhase
python3.14-pydna-5.5.16> Check whether the following modules can be imported: pydna pydna.assembly pydna.dseqrecord
python3.14-pydna-5.5.16> Running phase: pythonMetadataCheckPhase
python3.14-pydna-5.5.16> Executing pythonMetadataCheckPhase

post-build step Route build to niks3: ok
Pushing SBEE-Lab/bioinformatics-toolkits to https://niks3.sjanglab.org
time=2026-08-27T04:44:28.269+09:00 level=INFO msg="Uploading 0 paths to niks3.sjanglab.org (55 already cached)"
time=2026-08-27T04:44:29.154+09:00 level=INFO msg="Upload complete. (980ms)"